Curated BLAST for Genomes

 

Curated BLAST

Searching in Azospirillum brasilense Sp245 (azobra)

Found 6 curated entries in PaperBLAST's database that match '1.3.1.13'.

These curated entries have 5 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Azospirillum brasilense Sp245, or try another query

AZOBR_RS20490: cyclohexadienyl dehydrogenase
is similar to:
PaperBLAST

Ga0059261_2298: prephenate and/or arogenate dehydrogenase (EC 1.3.1.13) from Sphingomonas koreensis

33% id,
71% cov

AZOBR_RS00325: glycerol-3-phosphate dehydrogenase
is similar to:
PaperBLAST

Ga0059261_2298: prephenate and/or arogenate dehydrogenase (EC 1.3.1.13) from Sphingomonas koreensis

30% id,
53% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory