Curated BLAST for Genomes

 

Curated BLAST

Searching in Azospirillum brasilense Sp245 (azobra)

Found 51 curated entries in PaperBLAST's database that match '1.5.5.2'.

These curated entries have 41 distinct sequences.

Running ublast with E ≤ 0.01

Found 29 relevant proteins in Azospirillum brasilense Sp245, or try another query

AZOBR_RS23695: transcriptional regulator
is similar to:
PaperBLAST

AZOBR_RS23695: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Azospirillum brasilense

100% id,
100% cov

Ac3H11_2850: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Acidovorax sp.

64% id,
100% cov

RR42_RS20125: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Cupriavidus basilensis

65% id,
95% cov

More...

AZOBR_RS25515: hypothetical protein
is similar to:
PaperBLAST

O59445: proline dehydrogenase (EC 1.5.5.2) from Pyrococcus horikoshii

32% id,
97% cov

Q8U022: proline dehydrogenase (EC 1.5.5.2) from Pyrococcus furiosus

31% id,
97% cov

Q5JFG7: proline dehydrogenase (EC 1.5.5.2) from Thermococcus kodakarensis

30% id,
95% cov

AZOBR_RS25465: sarcosine oxidase subunit beta
is similar to:
PaperBLAST

Q5JFG2: proline dehydrogenase (EC 1.5.5.2) from Thermococcus kodakarensis

29% id,
100% cov

Q76M73: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus

29% id,
98% cov

O59445: proline dehydrogenase (EC 1.5.5.2) from Pyrococcus horikoshii

25% id,
100% cov

AZOBR_RS27120: FAD-dependent oxidoreductase
is similar to:
PaperBLAST

Q5JFG2: proline dehydrogenase (EC 1.5.5.2) from Thermococcus kodakarensis

29% id,
97% cov

O59089: proline dehydrogenase (EC 1.5.5.2) from Pyrococcus horikoshii

28% id,
98% cov

Q5JFG7: proline dehydrogenase (EC 1.5.5.2) from Thermococcus kodakarensis

28% id,
95% cov

More...

AZOBR_RS27105: FAD-dependent oxidoreductase
is similar to:
PaperBLAST

Q76M73: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus

25% id,
97% cov

Q5JFG2: proline dehydrogenase (EC 1.5.5.2) from Thermococcus kodakarensis

26% id,
90% cov

Q5JFG7: proline dehydrogenase (EC 1.5.5.2) from Thermococcus kodakarensis

23% id,
90% cov

More...

AZOBR_RS30970: glycine oxidase
is similar to:
PaperBLAST

O59089: proline dehydrogenase (EC 1.5.5.2) from Pyrococcus horikoshii

24% id,
95% cov

AZOBR_RS08855: FAD-dependent oxidoreductase
is similar to:
PaperBLAST

Q8U022: proline dehydrogenase (EC 1.5.5.2) from Pyrococcus furiosus

25% id,
91% cov

O59445: proline dehydrogenase (EC 1.5.5.2) from Pyrococcus horikoshii

24% id,
68% cov

AZOBR_RS03125: FAD dependent oxidoreductase
is similar to:
PaperBLAST

O59445: proline dehydrogenase (EC 1.5.5.2) from Pyrococcus horikoshii

23% id,
92% cov

Q5JFG2: proline dehydrogenase (EC 1.5.5.2) from Thermococcus kodakarensis

23% id,
91% cov

Q8U022: proline dehydrogenase (EC 1.5.5.2) from Pyrococcus furiosus

23% id,
92% cov

AZOBR_RS20515: alkyl hydroperoxide reductase subunit F
is similar to:
PaperBLAST

Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus

29% id,
67% cov

AZOBR_RS14390: dihydrolipoamide dehydrogenase
is similar to:
PaperBLAST

Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus

27% id,
64% cov

AZOBR_RS03960: dihydrolipoamide dehydrogenase
is similar to:
PaperBLAST

Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus

25% id,
67% cov

AZOBR_RS29185: aldehyde dehydrogenase
is similar to:
PaperBLAST

Psest_3079: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Pseudomonas stutzeri

33% id,
46% cov

Shewana3_0819: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella sp.

32% id,
45% cov

Sama_2676: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella amazonensis

31% id,
45% cov

More...

AZOBR_RS26825: aldehyde dehydrogenase
is similar to:
PaperBLAST

Psest_3079: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Pseudomonas stutzeri

31% id,
45% cov

Shewana3_0819: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella sp.

29% id,
45% cov

Sama_2676: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella amazonensis

29% id,
45% cov

More...

AZOBR_RS29750: aldehyde dehydrogenase
is similar to:
PaperBLAST

Psest_3079: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Pseudomonas stutzeri

32% id,
42% cov

Shewana3_0819: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella sp.

29% id,
46% cov

Sama_2676: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella amazonensis

29% id,
44% cov

More...

AZOBR_RS22500: methylmalonate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

Sama_2676: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella amazonensis

30% id,
45% cov

Psest_3079: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Pseudomonas stutzeri

29% id,
45% cov

Shewana3_0819: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella sp.

29% id,
43% cov

More...

AZOBR_RS09720: succinate-semialdehyde dehdyrogenase
is similar to:
PaperBLAST

Psest_3079: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Pseudomonas stutzeri

29% id,
45% cov

Sama_2676: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella amazonensis

28% id,
45% cov

Shewana3_0819: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella sp.

29% id,
43% cov

More...

AZOBR_RS19635: succinate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

Psest_3079: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Pseudomonas stutzeri

30% id,
45% cov

Shewana3_0819: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella sp.

28% id,
44% cov

Sama_2676: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella amazonensis

28% id,
44% cov

More...

AZOBR_RS22315: aldehyde dehydrogenase
is similar to:
PaperBLAST

Shewana3_0819: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella sp.

30% id,
44% cov

Psest_3079: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Pseudomonas stutzeri

30% id,
43% cov

Sama_2676: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella amazonensis

29% id,
44% cov

More...

AZOBR_RS33525: FAD-dependent oxidoreductase
is similar to:
PaperBLAST

Q8U022: proline dehydrogenase (EC 1.5.5.2) from Pyrococcus furiosus

23% id,
56% cov

O59445: proline dehydrogenase (EC 1.5.5.2) from Pyrococcus horikoshii

30% id,
24% cov

AZOBR_RS32620: aldehyde dehydrogenase
is similar to:
PaperBLAST

Sama_2676: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella amazonensis

29% id,
44% cov

Psest_3079: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Pseudomonas stutzeri

29% id,
44% cov

AZOBR_RS23695: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Azospirillum brasilense

32% id,
39% cov

More...

AZOBR_RS31000: aldehyde dehydrogenase
is similar to:
PaperBLAST

Psest_3079: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Pseudomonas stutzeri

28% id,
43% cov

Sama_2676: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella amazonensis

27% id,
42% cov

Shewana3_0819: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella sp.

27% id,
42% cov

More...

AZOBR_RS18165: 2 5-dioxovalerate dehydrogenase
is similar to:
PaperBLAST

HSERO_RS00905: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Herbaspirillum seropedicae

27% id,
37% cov

putA / Q88D80: proline dehydrogenase/1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.5.2) from Pseudomonas putida

30% id,
29% cov

Shewana3_0819: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella sp.

30% id,
28% cov

More...

AZOBR_RS02525: NAD(FAD)-utilizing dehydrogenase
is similar to:
PaperBLAST

Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus

29% id,
25% cov

AZOBR_RS27110: (2Fe-2S)-binding protein
is similar to:
PaperBLAST

Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus

36% id,
18% cov

AZOBR_RS32475: aldehyde Dehydrogenase
is similar to:
PaperBLAST

Sama_2676: L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) from Shewanella amazonensis

22% id,
28% cov

AZOBR_RS08870: FAD-dependent oxidoreductase
is similar to:
PaperBLAST

Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus

35% id,
16% cov

AZOBR_RS28130: pyridine nucleotide-disulfide oxidoreductase
is similar to:
PaperBLAST

O59089: proline dehydrogenase (EC 1.5.5.2) from Pyrococcus horikoshii

40% id,
11% cov

AZOBR_RS08020: D-amino acid dehydrogenase small subunit
is similar to:
PaperBLAST

Q8U022: proline dehydrogenase (EC 1.5.5.2) from Pyrococcus furiosus

54% id,
7% cov

Q8U1G2: proline dehydrogenase (EC 1.5.5.2) from Pyrococcus furiosus

45% id,
8% cov

O59089: proline dehydrogenase (EC 1.5.5.2) from Pyrococcus horikoshii

45% id,
8% cov

AZOBR_RS15570: 3-ketosteroid dehydrogenase
is similar to:
PaperBLAST

Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus

40% id,
9% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 29 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

774007-775347 (frame +1) on NC_016618.1
is similar to:
PaperBLAST

Q5JFG2: proline dehydrogenase (EC 1.5.5.2) from Thermococcus kodakarensis
Also see hits to annotated proteins above

34% id,
97% cov

Q76M73: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus
Also see hits to annotated proteins above

33% id,
97% cov

764314-766581 (frame -3) on NC_016618.1
is similar to:
PaperBLAST

Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus
Also see hits to annotated proteins above

33% id,
70% cov

O59088: proline dehydrogenase (subunit 2/2) (EC 1.5.5.2) from Pyrococcus horikoshii

33% id,
36% cov

Q76M76: proline dehydrogenase (EC 1.5.5.2) from Thermococcus profundus
Also see hits to annotated proteins above

37% id,
12% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory