Curated BLAST for Genomes

 

Curated BLAST

Searching in Azospirillum brasilense Sp245 (azobra)

Found 33 curated entries in PaperBLAST's database that match '2.3.3.5' as complete word(s).

These curated entries have 18 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Azospirillum brasilense Sp245, or try another query

AZOBR_RS24300: methylcitrate synthase
is similar to:
PaperBLAST

PRPC_CUPNE / Q937N9: 2-methylcitrate synthase; 2-MCS; MCS; Citrate synthase; EC 2.3.3.5; EC 2.3.3.16 from Cupriavidus necator
Q937N9: 2-methylcitrate synthase (EC 2.3.3.5) from Cupriavidus metallidurans

84% id,
98% cov

Q2Z1A8: 2-methylcitrate synthase (EC 2.3.3.5) from Cupriavidus necator

83% id,
97% cov

Q8X694: 2-methylcitrate synthase (EC 2.3.3.5) from Escherichia coli

79% id,
97% cov

More...

AZOBR_RS25925: type II citrate synthase
is similar to:
PaperBLAST

PRPC_ABDS2 / O34002: 2-methylcitrate synthase; 2-MCS; MCS; Citrate synthase; EC 2.3.3.5; EC 2.3.3.16 from Antarctic bacterium

34% id,
99% cov

PRPC2_CORGL / Q8NSL1: 2-methylcitrate synthase 2; 2-MCS; MCS; Citrate synthase 2; CS; EC 2.3.3.5; EC 2.3.3.16 from Corynebacterium glutamicum
Q8NSL1: 2-methylcitrate synthase (EC 2.3.3.5) from Corynebacterium glutamicum

34% id,
98% cov

Q9I5E3: 2-methylcitrate synthase (EC 2.3.3.5) from Pseudomonas aeruginosa

33% id,
97% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory