Curated BLAST for Genomes

 

Curated BLAST

Searching in Azospirillum brasilense Sp245 (azobra)

Found 120 curated entries in PaperBLAST's database that match '2.4.2.2'.

These curated entries have 82 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Azospirillum brasilense Sp245, or try another query

AZOBR_RS09940: 5'-methylthioadenosine phosphorylase
is similar to:
PaperBLAST

MTAP_RHORT / Q2RXH9: S-methyl-5'-thioadenosine phosphorylase; 5'-methylthioadenosine phosphorylase; MTA phosphorylase; MTAP; EC 2.4.2.28 from Rhodospirillum rubrum

67% id,
100% cov

MTAP_SACS2 / Q97W94: S-methyl-5'-thioadenosine phosphorylase; 5'-methylthioadenosine phosphorylase; MTA phosphorylase; MTAP; MTAPII; EC 2.4.2.28 from Saccharolobus solfataricus
Q97W94: purine-nucleoside phosphorylase (EC 2.4.2.1); S-methyl-5'-thioadenosine phosphorylase (EC 2.4.2.28) from Saccharolobus solfataricus

46% id,
100% cov

C6KFA4: S-methyl-5'-thioadenosine phosphorylase (EC 2.4.2.28) from uncultured bacterium

47% id,
96% cov

More...

AZOBR_RS06295: queuine tRNA-ribosyltransferase
is similar to:
PaperBLAST

TGT_ZYMMO / P28720: Queuine tRNA-ribosyltransferase; Guanine insertion enzyme; tRNA-guanine transglycosylase; EC 2.4.2.29 from Zymomonas mobilis
P28720: tRNA-guanosine34 preQ1 transglycosylase (EC 2.4.2.29); tRNA-guanosine34 queuine transglycosylase (EC 2.4.2.64) from Zymomonas mobilis

61% id,
95% cov

TGT_ECOLI / P0A847: Queuine tRNA-ribosyltransferase; Guanine insertion enzyme; tRNA-guanine transglycosylase; EC 2.4.2.29 from Escherichia coli
Tgt: tRNA-guanine transglycosylase (EC 2.4.2.29) from Escherichia coli
tgt / P0A847: tRNA-guanine transglycosylase (EC 2.4.2.29) from Escherichia coli
P0A847: tRNA-guanosine34 preQ1 transglycosylase (EC 2.4.2.29) from Escherichia coli

57% id,
94% cov

Q54177: tRNA-guanosine34 preQ1 transglycosylase (EC 2.4.2.29) from Shigella flexneri

57% id,
94% cov

More...

AZOBR_RS03460: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
is similar to:
PaperBLAST

cobT / P29935: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase subunit (EC 2.4.2.21) from Sinorhizobium sp.
P29935: nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) from Pseudomonas denitrificans

57% id,
99% cov

cobT / A0A0K1TPX5: nicotinate-nucleotide--5-methoxybenzimidazole phosphoribosyltransferase (EC 2.4.2.21) from Moorella thermoacetica

42% id,
91% cov

cobT / A0A1D9FP51: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) from Clostridium formicaceticum

38% id,
98% cov

More...

AZOBR_RS02340: xanthine phosphoribosyltransferase
is similar to:
PaperBLAST

XGPT_ECOLI / P0A9M5: Xanthine-guanine phosphoribosyltransferase; XGPRT; Xanthine phosphoribosyltransferase; EC 2.4.2.-; EC 2.4.2.22 from Escherichia coli
Gxu / b0238: xanthine-guanine phsophoribosyltransferase (EC 2.4.2.8; EC 2.4.2.22) from Escherichia coli
gpt / GB|AAN41945.1: xanthine phosphoribosyltransferase; EC 2.4.2.22 from Shigella sonnei
gpt / P0A9M5: xanthine-guanine phsophoribosyltransferase (EC 2.4.2.8; EC 2.4.2.22) from Escherichia coli

56% id,
99% cov

AZOBR_RS31175: polyphenol oxidase
is similar to:
PaperBLAST

PURNU_ECOLI / P33644: Purine nucleoside phosphorylase YfiH; Adenosine deaminase YfiH; Polyphenol oxidase YfiH; S-methyl-5'-thioadenosine phosphorylase YfiH; EC 2.4.2.1; EC 3.5.4.4; EC 1.10.3.-; EC 2.4.2.28 from Escherichia coli
yfiH / P33644: purine nucleoside phosphorylase YfiH (EC 2.4.2.1; EC 2.4.2.28; EC 3.5.4.4; EC 1.10.3.2) from Escherichia coli

38% id,
91% cov

PURNU_GEOS3 / P84138: Purine nucleoside phosphorylase YlmD; Adenosine deaminase YlmD; S-methyl-5'-thioadenosine phosphorylase YlmD; EC 2.4.2.1; EC 3.5.4.4; EC 2.4.2.28 from Geobacillus stearothermophilus

33% id,
87% cov

PURNU_UNKP / Q1EIR0: Adenosine deaminase RL5; Laccase RL5; Multicopper oxidase RL5; Polyphenol oxidase; Purine nucleoside phosphorylase RL5; S-methyl-5'-thioadenosine phosphorylase RL5; EC 3.5.4.4; EC 1.10.3.-; EC 2.4.2.1; EC 2.4.2.28 from Unknown prokaryotic

30% id,
88% cov

More...

AZOBR_RS06645: purine nucleoside phosphorylase
is similar to:
PaperBLAST

MTAP_HUMAN / Q13126: S-methyl-5'-thioadenosine phosphorylase; 5'-methylthioadenosine phosphorylase; MTA phosphorylase; MTAP; MTAPase; EC 2.4.2.28 from Homo sapiens
MTAP / Q13126: S-methyl-5'-thioadenosine phosphorylase (EC 2.4.2.28) from Homo sapiens
Q13126: S-methyl-5'-thioadenosine phosphorylase (EC 2.4.2.28) from Homo sapiens

28% id,
85% cov

MTAP_BOVIN / Q3MHF7: S-methyl-5'-thioadenosine phosphorylase; 5'-methylthioadenosine phosphorylase; MTA phosphorylase; MTAP; MTAPase; EC 2.4.2.28 from Bos taurus

28% id,
85% cov

MTAP_DROME / Q9V813: S-methyl-5'-thioadenosine phosphorylase; 5'-methylthioadenosine phosphorylase; MTA phosphorylase; MTAP; MTAPase; EC 2.4.2.28 from Drosophila melanogaster

27% id,
84% cov

More...

AZOBR_RS16740: cob(II)yrinic acid a c-diamide reductase
is similar to:
PaperBLAST

D7GJ95: aerobic 5,6-dimethylbenzimidazole synthase (EC 1.13.11.79); nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) from Propionibacterium freudenreichii

40% id,
34% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 9 reading frames. Except for 3 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

1409414-1410466 (frame +2) on NC_016617.1
is similar to:
PaperBLAST

Ttg / b4382: thymidine phosphorylase (EC 2.4.2.2; EC 2.4.2.4; EC 2.4.2.3) from Escherichia coli
deoA / P07650: thymidine phosphorylase (EC 2.4.2.2; EC 2.4.2.3) from Escherichia coli

62% id,
44% cov

Q72HS4: pyrimidine-nucleoside phosphorylase (EC 2.4.2.2) from Thermus thermophilus

45% id,
54% cov

Q5SHF9: pyrimidine-nucleoside phosphorylase (EC 2.4.2.2) from Thermus thermophilus

44% id,
54% cov

More...

1410354-1411127 (frame +3) on NC_016617.1
is similar to:
PaperBLAST

Ttg / b4382: thymidine phosphorylase (EC 2.4.2.2; EC 2.4.2.4; EC 2.4.2.3) from Escherichia coli
deoA / P07650: thymidine phosphorylase (EC 2.4.2.2; EC 2.4.2.3) from Escherichia coli

45% id,
57% cov

Q5SHF9: pyrimidine-nucleoside phosphorylase (EC 2.4.2.2) from Thermus thermophilus

40% id,
56% cov

Q72HS4: pyrimidine-nucleoside phosphorylase (EC 2.4.2.2) from Thermus thermophilus

40% id,
56% cov

More...

512410-513450 (frame +1) on NC_016594.1
is similar to:
PaperBLAST

D7GJ95: aerobic 5,6-dimethylbenzimidazole synthase (EC 1.13.11.79); nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) from Propionibacterium freudenreichii
Also see hits to annotated proteins above

40% id,
35% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory