Curated BLAST for Genomes

 

Curated BLAST

Searching in Azospirillum brasilense Sp245 (azobra)

Found 5 curated entries in PaperBLAST's database that match '2.6.1.66' as complete word(s).

These curated entries have 2 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Azospirillum brasilense Sp245, or try another query

AZOBR_RS11880: 1-aminocyclopropane-1-carboxylate deaminase
is similar to:
PaperBLAST

AVTA_MYCTU / P96847: Valine--pyruvate aminotransferase; Alanine--valine transaminase; EC 2.6.1.66 from Mycobacterium tuberculosis

57% id,
98% cov

AVTA_ECOLI / P09053: Valine--pyruvate aminotransferase; Alanine--valine transaminase; Transaminase C; EC 2.6.1.66 from Escherichia coli
AvtA / b3572: valine—pyruvate aminotransferase (EC 2.6.1.66) from Escherichia coli
avtA / P09053: valine—pyruvate aminotransferase (EC 2.6.1.66) from Escherichia coli
P09053: valine-pyruvate transaminase (EC 2.6.1.66) from Escherichia coli

24% id,
84% cov

AZOBR_RS24065: aspartate aminotransferase
is similar to:
PaperBLAST

AVTA_MYCTU / P96847: Valine--pyruvate aminotransferase; Alanine--valine transaminase; EC 2.6.1.66 from Mycobacterium tuberculosis

34% id,
99% cov

AVTA_ECOLI / P09053: Valine--pyruvate aminotransferase; Alanine--valine transaminase; Transaminase C; EC 2.6.1.66 from Escherichia coli
AvtA / b3572: valine—pyruvate aminotransferase (EC 2.6.1.66) from Escherichia coli
avtA / P09053: valine—pyruvate aminotransferase (EC 2.6.1.66) from Escherichia coli
P09053: valine-pyruvate transaminase (EC 2.6.1.66) from Escherichia coli

25% id,
81% cov

AZOBR_RS12970: aspartate aminotransferase
is similar to:
PaperBLAST

AVTA_MYCTU / P96847: Valine--pyruvate aminotransferase; Alanine--valine transaminase; EC 2.6.1.66 from Mycobacterium tuberculosis

30% id,
93% cov

AZOBR_RS20195: aminotransferase
is similar to:
PaperBLAST

AVTA_MYCTU / P96847: Valine--pyruvate aminotransferase; Alanine--valine transaminase; EC 2.6.1.66 from Mycobacterium tuberculosis

29% id,
91% cov

AZOBR_RS07650: aspartate aminotransferase
is similar to:
PaperBLAST

AVTA_MYCTU / P96847: Valine--pyruvate aminotransferase; Alanine--valine transaminase; EC 2.6.1.66 from Mycobacterium tuberculosis

29% id,
90% cov

AZOBR_RS30390: aspartate aminotransferase
is similar to:
PaperBLAST

AVTA_MYCTU / P96847: Valine--pyruvate aminotransferase; Alanine--valine transaminase; EC 2.6.1.66 from Mycobacterium tuberculosis

25% id,
45% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory