Curated BLAST for Genomes

 

Curated BLAST

Searching in Azospirillum brasilense Sp245 (azobra)

Found 9 curated entries in PaperBLAST's database that match '2.7.1.16' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Azospirillum brasilense Sp245, or try another query

AZOBR_RS25905: glycerol kinase
is similar to:
PaperBLAST

Q9KBQ3: ribulokinase (EC 2.7.1.16) from Alkalihalobacillus halodurans

26% id,
49% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

432100-433086 (frame -2) on NC_016595.1
is similar to:
PaperBLAST

CA265_RS08625: Ribulokinase (EC 2.7.1.16) from Pedobacter sp.

27% id,
39% cov

Echvi_0515: Ribulokinase (EC 2.7.1.16) from Echinicola vietnamensis

27% id,
33% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory