Curated BLAST for Genomes

 

Curated BLAST

Searching in Azospirillum brasilense Sp245 (azobra)

Found 46 curated entries in PaperBLAST's database that match '2.7.1.4' as complete word(s).

These curated entries have 39 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Azospirillum brasilense Sp245, or try another query

AZOBR_RS11685: hypothetical protein
is similar to:
PaperBLAST

MAK_ECOLI / P23917: Fructokinase; D-fructose kinase; Manno(fructo)kinase; EC 2.7.1.4 from Escherichia coli
Mak / b0394: fructokinase (EC 2.7.1.7; EC 2.7.1.4) from Escherichia coli
mak / P23917: fructokinase (EC 2.7.1.7; EC 2.7.1.4) from Escherichia coli

46% id,
100% cov

AZOBR_RS29860: ketodeoxygluconokinase
is similar to:
PaperBLAST

SCRK1_MAIZE / Q6XZ79: Fructokinase-1; ZmFRK1; EC 2.7.1.4 from Zea mays

26% id,
98% cov

SCRK1_ORYSI / A2WXV8: Fructokinase-1; Fructokinase I; OsFKI; EC 2.7.1.4 from Oryza sativa

27% id,
95% cov

SCRK1_ORYSJ / Q0JGZ6: Fructokinase-1; Fructokinase I; OsFKI; EC 2.7.1.4 from Oryza sativa

27% id,
95% cov

More...

AZOBR_RS03940: D-beta-D-heptose 1-phosphate adenosyltransferase
is similar to:
PaperBLAST

Dshi_2797: Fructokinase (EC 2.7.1.4) from Dinoroseobacter shibae

26% id,
96% cov

AZOBR_RS27950: transcriptional regulator
is similar to:
PaperBLAST

Ga0059261_1776: Fructokinase (EC 2.7.1.4) from Sphingomonas koreensis

28% id,
89% cov

MAK_ECOLI / P23917: Fructokinase; D-fructose kinase; Manno(fructo)kinase; EC 2.7.1.4 from Escherichia coli
Mak / b0394: fructokinase (EC 2.7.1.7; EC 2.7.1.4) from Escherichia coli
mak / P23917: fructokinase (EC 2.7.1.7; EC 2.7.1.4) from Escherichia coli

28% id,
85% cov

AZOBR_RS33905: D-beta-D-heptose 1-phosphate adenosyltransferase
is similar to:
PaperBLAST

AO356_00035: Fructokinase (EC 2.7.1.4) from Pseudomonas fluorescens

24% id,
87% cov

Pf6N2E2_1965: Fructokinase (EC 2.7.1.4) from Pseudomonas fluorescens

24% id,
86% cov

AZOBR_RS01550: carbohydrate kinase
is similar to:
PaperBLAST

Q42896: fructokinase (EC 2.7.1.4) from Solanum lycopersicum

24% id,
73% cov

P37829: fructokinase (EC 2.7.1.4) from Solanum tuberosum

24% id,
72% cov

AZOBR_RS30840: hypothetical protein
is similar to:
PaperBLAST

cscK / GB|CAA57218.2: fructokinase; EC 2.7.1.4 from Escherichia coli

30% id,
44% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 10 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

621965-622570 (frame +2) on NC_016596.1
is similar to:
PaperBLAST

Dshi_2797: Fructokinase (EC 2.7.1.4) from Dinoroseobacter shibae
Also see hits to annotated proteins above

32% id,
56% cov

BPHYT_RS02045: Fructokinase (EC 2.7.1.4) from Burkholderia phytofirmans

30% id,
53% cov

SCRK_KLEPN / P26420: Fructokinase; EC 2.7.1.4 from Klebsiella pneumoniae
scrK / GB|CAA43322.1: fructokinase; EC 2.7.1.4 from Klebsiella pneumoniae
scrK / P26420: fructokinase (EC 2.7.1.4) from Klebsiella pneumoniae

31% id,
39% cov

283823-287545 (frame -1) on NC_016596.1
is similar to:
PaperBLAST

frk / GB|AAB52373.1: fructokinase; EC 2.7.1.4 from Rhizobium leguminosarum

36% id,
25% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory