Curated BLAST for Genomes

 

Curated BLAST

Searching in Azospirillum brasilense Sp245 (azobra)

Found 11 curated entries in PaperBLAST's database that match '2.7.1.56' as complete word(s).

These curated entries have 8 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Azospirillum brasilense Sp245, or try another query

AZOBR_RS30840: hypothetical protein
is similar to:
PaperBLAST

K1PF_XANCP / P23354: 1-phosphofructokinase; Fructose 1-phosphate kinase; Fru1PK; EC 2.7.1.56 from Xanthomonas campestris

47% id,
94% cov

Psest_3354: 1-phosphofructokinase (EC 2.7.1.56) from Pseudomonas stutzeri

41% id,
98% cov

AO356_07330: 1-phosphofructokinase (EC 2.7.1.56) from Pseudomonas fluorescens

40% id,
98% cov

More...

AZOBR_RS33905: D-beta-D-heptose 1-phosphate adenosyltransferase
is similar to:
PaperBLAST

K1PF_VIBCH / Q9KM71: 1-phosphofructokinase; Fructose 1-phosphate kinase; Fru1PK; EC 2.7.1.56 from Vibrio cholerae

25% id,
87% cov

AZOBR_RS03940: D-beta-D-heptose 1-phosphate adenosyltransferase
is similar to:
PaperBLAST

Psest_3354: 1-phosphofructokinase (EC 2.7.1.56) from Pseudomonas stutzeri

26% id,
79% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

621965-622570 (frame +2) on NC_016596.1
is similar to:
PaperBLAST

K1PF_XANCP / P23354: 1-phosphofructokinase; Fructose 1-phosphate kinase; Fru1PK; EC 2.7.1.56 from Xanthomonas campestris
Also see hits to annotated proteins above

49% id,
63% cov

K1PF_HALVD / D4GYE6: 1-phosphofructokinase; Fructose 1-phosphate kinase; Fru1PK; EC 2.7.1.56 from Haloferax volcanii
D4GYE6: 1-phosphofructokinase (EC 2.7.1.56) from Haloferax volcanii
Also see hits to annotated proteins above

37% id,
58% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory