Curated BLAST for Genomes

 

Curated BLAST

Searching in Azospirillum brasilense Sp245 (azobra)

Found 9 curated entries in PaperBLAST's database that match '2.7.1.58' as complete word(s).

These curated entries have 7 distinct sequences.

Running ublast with E ≤ 0.01

Found 0 relevant proteins in Azospirillum brasilense Sp245, or try another query

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

109151-110197 (frame -2) on NC_016618.1
is similar to:
PaperBLAST

N515DRAFT_1233: 2-dehydro-3-deoxygalactonokinase dgoK (EC 2.7.1.58) from Dyella japonica

45% id,
70% cov

HSERO_RS05160: 2-dehydro-3-deoxygalactonokinase dgoK (EC 2.7.1.58) from Herbaspirillum seropedicae

41% id,
70% cov

BPHYT_RS16950: 2-dehydro-3-deoxygalactonokinase DgoK (EC 2.7.1.58) from Burkholderia phytofirmans

45% id,
64% cov

More...

109081-109476 (frame -3) on NC_016618.1
is similar to:
PaperBLAST

BPHYT_RS16950: 2-dehydro-3-deoxygalactonokinase DgoK (EC 2.7.1.58) from Burkholderia phytofirmans

37% id,
38% cov

N515DRAFT_1233: 2-dehydro-3-deoxygalactonokinase dgoK (EC 2.7.1.58) from Dyella japonica

35% id,
37% cov

HSERO_RS05160: 2-dehydro-3-deoxygalactonokinase dgoK (EC 2.7.1.58) from Herbaspirillum seropedicae

40% id,
32% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory