Curated BLAST for Genomes

 

Curated BLAST

Searching in Azospirillum brasilense Sp245 (azobra)

Found 52 curated entries in PaperBLAST's database that match '2.7.1.8'.

These curated entries have 36 distinct sequences.

Running ublast with E ≤ 0.01

Found 9 relevant proteins in Azospirillum brasilense Sp245, or try another query

AZOBR_RS05405: glucokinase
is similar to:
PaperBLAST

Glk / b2388: glucokinase (EC 2.7.1.1; EC 2.7.1.2; EC 2.7.1.8) from Escherichia coli
glk / P0A6V8: glucokinase (EC 2.7.1.1; EC 2.7.1.8) from Escherichia coli

46% id,
94% cov

AZOBR_RS09450: alpha-amylase
is similar to:
PaperBLAST

GLCNK_STRJI / A0A1H7TQR5: Glucosamine kinase; GlcN kinase; GlcNK; EC 2.7.1.8 from Streptacidiphilus jiangxiensis
A0A1H7TQR5: glucosamine kinase (EC 2.7.1.8) from Streptacidiphilus jiangxiensis

29% id,
93% cov

GLCNK_MYCS2 / I7FJX8: Glucosamine kinase; GlcN kinase; GlcNK; EC 2.7.1.8 from Mycolicibacterium smegmatis
I7FJX8: glucosamine kinase (EC 2.7.1.8) from Mycolicibacterium smegmatis

28% id,
89% cov

AZOBR_RS16610: fused trehalose maltokinase and malto-oligosyltrehalose trehalohydrolase
is similar to:
PaperBLAST

GLCNK_STRJI / A0A1H7TQR5: Glucosamine kinase; GlcN kinase; GlcNK; EC 2.7.1.8 from Streptacidiphilus jiangxiensis
A0A1H7TQR5: glucosamine kinase (EC 2.7.1.8) from Streptacidiphilus jiangxiensis

27% id,
94% cov

GLCNK_MYCS2 / I7FJX8: Glucosamine kinase; GlcN kinase; GlcNK; EC 2.7.1.8 from Mycolicibacterium smegmatis
I7FJX8: glucosamine kinase (EC 2.7.1.8) from Mycolicibacterium smegmatis

28% id,
90% cov

AZOBR_RS11685: hypothetical protein
is similar to:
PaperBLAST

BGLK_LISMO / Q8Y3R9: Beta-glucoside kinase; EC 2.7.1.85 from Listeria monocytogenes

24% id,
98% cov

BGLK_LISIN / Q926Y3: Beta-glucoside kinase; EC 2.7.1.85 from Listeria innocua

24% id,
98% cov

AZOBR_RS27950: transcriptional regulator
is similar to:
PaperBLAST

BGLK_LISMO / Q8Y3R9: Beta-glucoside kinase; EC 2.7.1.85 from Listeria monocytogenes

27% id,
85% cov

BGLK_KLEPN / Q93LQ8: Beta-glucoside kinase; EC 2.7.1.85 from Klebsiella pneumoniae

27% id,
82% cov

BGLK_LISIN / Q926Y3: Beta-glucoside kinase; EC 2.7.1.85 from Listeria innocua

29% id,
69% cov

AZOBR_RS09950: pseudouridine-5'-phosphate glycosidase
is similar to:
PaperBLAST

YOW5_SCHPO / Q9USY1: Pseudouridine-metabolizing bifunctional protein C1861.05; EC 4.2.1.70; EC 2.7.1.83 from Schizosaccharomyces pombe

50% id,
41% cov

AZOBR_RS12545: inorganic polyphosphate kinase
is similar to:
PaperBLAST

POS5_SCHPO / Q9UT98: NADH kinase pos5, mitochondrial; EC 2.7.1.86 from Schizosaccharomyces pombe

30% id,
55% cov

C7GJD6: NADH kinase (EC 2.7.1.86) from Saccharomyces cerevisiae

34% id,
48% cov

POS5_YEAST / Q06892: NADH kinase POS5, mitochondrial; EC 2.7.1.86 from Saccharomyces cerevisiae
Q06892: NAD+ kinase (EC 2.7.1.23); NADH kinase (EC 2.7.1.86) from Saccharomyces cerevisiae

33% id,
48% cov

More...

AZOBR_RS01550: carbohydrate kinase
is similar to:
PaperBLAST

SM_b21217: glucosamine kinase (EC 2.7.1.8) from Sinorhizobium meliloti

35% id,
38% cov

AZOBR_RS22610: hypothetical protein
is similar to:
PaperBLAST

CHKA_HUMAN / P35790: Choline kinase alpha; CK; CHETK-alpha; Ethanolamine kinase; EK; EC 2.7.1.32; EC 2.7.1.82 from Homo sapiens

46% id,
8% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 14 reading frames. Except for 5 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

2443464-2444429 (frame -3) on NC_016617.1
is similar to:
PaperBLAST

BGLK_KLEPN / Q93LQ8: Beta-glucoside kinase; EC 2.7.1.85 from Klebsiella pneumoniae
Also see hits to annotated proteins above

26% id,
95% cov

425386-426819 (frame -2) on NC_016595.1
is similar to:
PaperBLAST

HYKK_HUMAN / A2RU49: Hydroxylysine kinase; 5-hydroxy-L-lysine kinase; Aminoglycoside phosphotransferase domain-containing protein 1; EC 2.7.1.81 from Homo sapiens
A2RU49: hydroxylysine kinase (EC 2.7.1.81) from Homo sapiens

29% id,
75% cov

621965-622570 (frame +2) on NC_016596.1
is similar to:
PaperBLAST

SM_b21217: glucosamine kinase (EC 2.7.1.8) from Sinorhizobium meliloti
Also see hits to annotated proteins above

32% id,
53% cov

PSUK_ECOLI / P30235: Pseudouridine kinase; EC 2.7.1.83 from Escherichia coli
PsuK / b2166: putative pseudouridine kinase (EC 2.7.1.83) from Escherichia coli
P30235: pseudouridine kinase (EC 2.7.1.83) from Escherichia coli

28% id,
39% cov

yeiC / Q1R9Q6: pseudouridine kinase (EC 2.7.1.83) from Escherichia coli

30% id,
32% cov

627827-628891 (frame -2) on NC_016618.1
is similar to:
PaperBLAST

CHKA_HUMAN / P35790: Choline kinase alpha; CK; CHETK-alpha; Ethanolamine kinase; EK; EC 2.7.1.32; EC 2.7.1.82 from Homo sapiens
Also see hits to annotated proteins above

39% id,
13% cov

9266-9433 (frame +2) on NC_016619.1
is similar to:
PaperBLAST

CHKA_MOUSE / O54804: Choline kinase alpha; CK; CHETK-alpha; Ethanolamine kinase; EK; EC 2.7.1.32; EC 2.7.1.82 from Mus musculus

55% id,
6% cov

CHKA_RAT / Q01134: Choline kinase alpha; CK; CHETK-alpha; Ethanolamine kinase; EK; EC 2.7.1.32; EC 2.7.1.82 from Rattus norvegicus

55% id,
6% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory