Curated BLAST for Genomes

 

Curated BLAST

Searching in Azospirillum brasilense Sp245 (azobra)

Found 78 curated entries in PaperBLAST's database that match '2.7.2.1'.

These curated entries have 52 distinct sequences.

Running ublast with E ≤ 0.01

Found 9 relevant proteins in Azospirillum brasilense Sp245, or try another query

AZOBR_RS29810: phosphoribosylglycinamide formyltransferase
is similar to:
PaperBLAST

PurT / b1849: phosphoribosylglycinamide formyltransferase 2 (EC 2.7.2.15; EC 2.7.2.1) from Escherichia coli
purT / P33221: phosphoribosylglycinamide formyltransferase 2 (EC 6.3.1.21; EC 2.7.2.15) from Escherichia coli

54% id,
97% cov

AZOBR_RS12495: acetate kinase
is similar to:
PaperBLAST

Q3IYF1: fatty acid kinase (EC 2.7.2.18) from Cereibacter sphaeroides

54% id,
95% cov

ACKA_BACSU / P37877: Acetate kinase; Acetokinase; EC 2.7.2.1 from Bacillus subtilis

43% id,
98% cov

ackA / P71104: acetate kinase monomer (EC 2.7.2.15) from Clostridium acetobutylicum

40% id,
98% cov

More...

AZOBR_RS04605: acetate kinase
is similar to:
PaperBLAST

Q3IYF1: fatty acid kinase (EC 2.7.2.18) from Cereibacter sphaeroides

52% id,
99% cov

ACKA_THEMA / Q9WYB1: Acetate kinase; Acetokinase; EC 2.7.2.1 from Thermotoga maritima
ackA / PDB|2IIR_A: acetate kinase; EC 2.7.2.1 from Thermotoga maritima
Q9WYB1: acetate kinase (EC 2.7.2.1) from Thermotoga maritima

41% id,
99% cov

PDUW_SALTY / P74879: Propionate kinase PduW; EC 2.7.2.15 from Salmonella typhimurium

42% id,
96% cov

More...

AZOBR_RS04095: glutamate 5-kinase
is similar to:
PaperBLAST

Ga0059261_3512: glutamate 5-kinase (EC 2.7.2.11) from Sphingomonas koreensis

53% id,
97% cov

PROB_ECOLI / P0A7B5: Glutamate 5-kinase; Gamma-glutamyl kinase; GK; EC 2.7.2.11 from Escherichia coli
ProB / b0242: glutamate 5-kinase (EC 2.7.2.11) from Escherichia coli
proB: glutamate 5-kinase; EC 2.7.2.11 from Escherichia coli
proB / P0A7B5: glutamate 5-kinase (EC 2.7.2.11) from Escherichia coli
P0A7B5: glutamate 5-kinase (EC 2.7.2.11) from Escherichia coli

43% id,
100% cov

P9WHU9: glutamate 5-kinase (EC 2.7.2.11) from Mycobacterium tuberculosis

44% id,
95% cov

More...

AZOBR_RS03285: acetylglutamate kinase
is similar to:
PaperBLAST

lysZ / Q5SH27: [LysW]-L-2-aminoadipate 6-kinase monomer (EC 2.7.2.17) from Thermus thermophilus

28% id,
99% cov

LYSZ_THET2 / O50147: [LysW]-aminoadipate kinase; EC 2.7.2.17 from Thermus thermophilus

28% id,
99% cov

LYSZ_SULAC / Q4JAQ2: [LysW]-aminoadipate/[LysW]-glutamate kinase; EC 2.7.2.17; EC 2.7.2.19 from Sulfolobus acidocaldarius
lysZ / Q4JAQ2: [LysW}-glutamate/[LysW]-aminoadipate kinase (EC 2.7.2.17; EC 2.7.2.19) from Sulfolobus acidocaldarius
Q4JAQ2: [amino group carrier protein]-L-2-aminoadipate 6-kinase (EC 2.7.2.17) from Sulfolobus acidocaldarius

28% id,
99% cov

AZOBR_RS06140: phosphoribosylaminoimidazole carboxylase
is similar to:
PaperBLAST

PurT / b1849: phosphoribosylglycinamide formyltransferase 2 (EC 2.7.2.15; EC 2.7.2.1) from Escherichia coli
purT / P33221: phosphoribosylglycinamide formyltransferase 2 (EC 6.3.1.21; EC 2.7.2.15) from Escherichia coli

28% id,
91% cov

AZOBR_RS04075: gamma-glutamyl phosphate reductase
is similar to:
PaperBLAST

P5CS1_ORYSJ / O04226: Delta-1-pyrroline-5-carboxylate synthase 1; OsP5CS1; EC 2.7.2.11; EC 1.2.1.41 from Oryza sativa

38% id,
58% cov

P5CS1 / P54887: δ1-pyrroline-5-carboxylate synthetase (EC 1.2.1.41; EC 2.7.2.11) from Arabidopsis thaliana

38% id,
56% cov

P5CS2_ORYSJ / Q941T1: Delta-1-pyrroline-5-carboxylate synthase 2; OsP5CS2; EC 2.7.2.11; EC 1.2.1.41 from Oryza sativa

36% id,
54% cov

More...

AZOBR_RS12015: acetyl-CoA carboxylase biotin carboxylase subunit
is similar to:
PaperBLAST

PurT / b1849: phosphoribosylglycinamide formyltransferase 2 (EC 2.7.2.15; EC 2.7.2.1) from Escherichia coli
purT / P33221: phosphoribosylglycinamide formyltransferase 2 (EC 6.3.1.21; EC 2.7.2.15) from Escherichia coli

24% id,
79% cov

AZOBR_RS33655: uridine kinase
is similar to:
PaperBLAST

G5K_LEIDO / A0A0R6Y3I5: Glutamate 5-kinase; LdG5K; Gamma-glutamyl kinase; EC 2.7.2.11 from Leishmania donovani
A0A0R6Y3I5: glutamate 5-kinase (EC 2.7.2.11) from Leishmania donovani

30% id,
40% cov

P9WHU9: glutamate 5-kinase (EC 2.7.2.11) from Mycobacterium tuberculosis

42% id,
10% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 9 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

124562-125674 (frame +2) on NC_016596.1
is similar to:
PaperBLAST

Q3IYF1: fatty acid kinase (EC 2.7.2.18) from Cereibacter sphaeroides
Also see hits to annotated proteins above

53% id,
89% cov

PDUW_CITFR / B1VB81: Propionate kinase; EC 2.7.2.15 from Citrobacter freundii
Also see hits to annotated proteins above

44% id,
79% cov

PDUW_SALTY / P74879: Propionate kinase PduW; EC 2.7.2.15 from Salmonella typhimurium
Also see hits to annotated proteins above

43% id,
79% cov

More...

1302708-1303790 (frame -3) on NC_016617.1
is similar to:
PaperBLAST

PurT / b1849: phosphoribosylglycinamide formyltransferase 2 (EC 2.7.2.15; EC 2.7.2.1) from Escherichia coli
purT / P33221: phosphoribosylglycinamide formyltransferase 2 (EC 6.3.1.21; EC 2.7.2.15) from Escherichia coli
Also see hits to annotated proteins above

28% id,
93% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory