Curated BLAST for Genomes

 

Curated BLAST

Searching in Azospirillum brasilense Sp245 (azobra)

Found 17 curated entries in PaperBLAST's database that match '3.2.1.108' as complete word(s).

These curated entries have 12 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Azospirillum brasilense Sp245, or try another query

AZOBR_RS26075: beta-glucosidase
is similar to:
PaperBLAST

AAQ79765.1: lactase phlorizin hydrolase (LCT;LPH) (EC 3.2.1.108|3.2.1.62)

37% id,
98% cov

LPH_RAT / Q02401: Lactase/phlorizin hydrolase; Lactase/glycosylceramidase; EC 3.2.1.108; EC 3.2.1.62 from Rattus norvegicus
Q02401: lactase (EC 3.2.1.108); phloretin hydrolase (EC 3.7.1.4) from Rattus norvegicus

38% id,
24% cov

LPH_SHEEP / W5PLZ6: Lactase/phlorizin hydrolase; Lactase/glycosylceramidase; EC 3.2.1.108; EC 3.2.1.62 from Ovis aries

37% id,
24% cov

More...

AZOBR_RS16895: beta-glucosidase
is similar to:
PaperBLAST

AAQ79765.1: lactase phlorizin hydrolase (LCT;LPH) (EC 3.2.1.108|3.2.1.62)

35% id,
100% cov

LPH_RAT / Q02401: Lactase/phlorizin hydrolase; Lactase/glycosylceramidase; EC 3.2.1.108; EC 3.2.1.62 from Rattus norvegicus
Q02401: lactase (EC 3.2.1.108); phloretin hydrolase (EC 3.7.1.4) from Rattus norvegicus

38% id,
25% cov

CAA30801.1: lactase-phlorizin hydrolase (Lct) (EC 3.2.1.108|3.2.1.62)

37% id,
25% cov

More...

AZOBR_RS26030: beta-glucosidase
is similar to:
PaperBLAST

AAQ79765.1: lactase phlorizin hydrolase (LCT;LPH) (EC 3.2.1.108|3.2.1.62)

35% id,
99% cov

CAA30801.1: lactase-phlorizin hydrolase (Lct) (EC 3.2.1.108|3.2.1.62)

35% id,
24% cov

LPH_HUMAN / P09848: Lactase/phlorizin hydrolase; Lactase/glycosylceramidase; EC 3.2.1.108; EC 3.2.1.62 from Homo sapiens
LCT / P09848: lactase-phlorizin hydrolase subunit (EC 3.2.1.62; EC 3.2.1.108) from Homo sapiens
P09848: lactase (EC 3.2.1.108); glycosylceramidase (EC 3.2.1.62); phloretin hydrolase (EC 3.7.1.4) from Homo sapiens

35% id,
24% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory