Curated BLAST for Genomes

 

Curated BLAST

Searching in Azospirillum brasilense Sp245 (azobra)

Found 331 curated entries in PaperBLAST's database that match '3.2.1.23' as complete word(s).

These curated entries have 255 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Azospirillum brasilense Sp245, or try another query

AZOBR_RS31660: beta-glucosidase
is similar to:
PaperBLAST

AFA35120.1: β-galactosidase (BgalH) (EC 3.2.1.23)

60% id,
95% cov

AZOBR_RS26030: beta-glucosidase
is similar to:
PaperBLAST

A0A1E1FFN6: beta-glucosidase (EC 3.2.1.21); beta-galactosidase (EC 3.2.1.23); beta-D-fucosidase (EC 3.2.1.38) from uncultured microorganism

50% id,
96% cov

ABI35984.1: β-glycosidase (β-gly) (EC 3.2.1.21|3.2.1.23)

47% id,
98% cov

GH1A_CALOW / E4Q361: Multifunctional glycoside hydrolase; Multifunctional GH; CoGH1A; EC 3.2.1.21; EC 3.2.1.23; EC 3.2.1.37; EC 3.2.1.74; EC 3.2.1.91 from Caldicellulosiruptor owensensis

40% id,
100% cov

More...

AZOBR_RS16895: beta-glucosidase
is similar to:
PaperBLAST

ABI35984.1: β-glycosidase (β-gly) (EC 3.2.1.21|3.2.1.23)

49% id,
98% cov

A0A1E1FFN6: beta-glucosidase (EC 3.2.1.21); beta-galactosidase (EC 3.2.1.23); beta-D-fucosidase (EC 3.2.1.38) from uncultured microorganism

44% id,
97% cov

GH1A_CALOW / E4Q361: Multifunctional glycoside hydrolase; Multifunctional GH; CoGH1A; EC 3.2.1.21; EC 3.2.1.23; EC 3.2.1.37; EC 3.2.1.74; EC 3.2.1.91 from Caldicellulosiruptor owensensis

41% id,
100% cov

More...

AZOBR_RS26075: beta-glucosidase
is similar to:
PaperBLAST

ABI35984.1: β-glycosidase (β-gly) (EC 3.2.1.21|3.2.1.23)

45% id,
99% cov

GH1A_CALOW / E4Q361: Multifunctional glycoside hydrolase; Multifunctional GH; CoGH1A; EC 3.2.1.21; EC 3.2.1.23; EC 3.2.1.37; EC 3.2.1.74; EC 3.2.1.91 from Caldicellulosiruptor owensensis

42% id,
99% cov

ACL74759.1: cellodextrin glucohydrolase (Ccel_0374) (EC 3.2.1.21|3.2.1.23|3.2.1.74)

41% id,
98% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 8 reading frames. Except for 3 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

239509-240972 (frame -2) on NC_016595.1
is similar to:
PaperBLAST

ABW87309.1: β-galactosidase (β-gal;BgaA) (EC 3.2.1.23)

29% id,
79% cov

CAB75342.1: β-galactosidase (BIF1;OLGA1) (EC 3.2.1.23)

26% id,
30% cov

BGA2_ECOLI / P06864: Evolved beta-galactosidase subunit alpha; Beta-gal; Lactase; EC 3.2.1.23 from Escherichia coli

28% id,
25% cov

More...

240228-241463 (frame -3) on NC_016595.1
is similar to:
PaperBLAST

SM_b21655: Beta-galactosidase (EC 3.2.1.23) from Sinorhizobium meliloti

27% id,
24% cov

CAC50570.1: β-galactosidase (Lac) (EC 3.2.1.23)

24% id,
25% cov

BAA34817.1: β-galactosidase (EC 3.2.1.23)

25% id,
20% cov

30283-32166 (frame -3) on NC_016619.1
is similar to:
PaperBLAST

CAC14566.2: β-galactosidase (BIF3) (EC 3.2.1.23)

29% id,
8% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory