Curated BLAST for Genomes

 

Curated BLAST

Searching in Azospirillum brasilense Sp245 (azobra)

Found 52 curated entries in PaperBLAST's database that match '3.5.1.1' as complete word(s).

These curated entries have 43 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Azospirillum brasilense Sp245, or try another query

AZOBR_RS00830: L-asparaginase
is similar to:
PaperBLAST

PGA1_c36210: L-asparaginase (EC 3.5.1.1) from Phaeobacter inhibens

41% id,
97% cov

Q9RFN5: asparaginase (EC 3.5.1.1) from Rhizobium etli

32% id,
91% cov

W0KM71: asparaginase (EC 3.5.1.1) from Nocardiopsis alba

32% id,
91% cov

AZOBR_RS02885: ankyrin
is similar to:
PaperBLAST

LPP60_RAT / O88202: 60 kDa lysophospholipase; Lysophospholipase-transacylase; EC 3.1.1.5; EC 3.5.1.1; EC 3.1.1.47 from Rattus norvegicus

34% id,
24% cov

H0W0T5: asparaginase (EC 3.5.1.1) from Cavia porcellus

31% id,
19% cov

AZOBR_RS11690: hypothetical protein
is similar to:
PaperBLAST

ASPG_DIRIM / Q9U518: L-asparaginase; DiAsp; L-asparagine amidohydrolase; EC 3.5.1.1 from Dirofilaria immitis

24% id,
25% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

2444479-2446977 (frame +1) on NC_016617.1
is similar to:
PaperBLAST

H0W0T5: asparaginase (EC 3.5.1.1) from Cavia porcellus
Also see hits to annotated proteins above

29% id,
26% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory