Curated BLAST for Genomes

 

Curated BLAST

Searching in Azospirillum brasilense Sp245 (azobra)

Found 36 curated entries in PaperBLAST's database that match '3.5.1.25'.

These curated entries have 27 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Azospirillum brasilense Sp245, or try another query

AZOBR_RS11675: N-acetylglucosamine 6-phosphate deacetylase
is similar to:
PaperBLAST

CCNA_00452: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Caulobacter crescentus

52% id,
99% cov

Ga0059261_1645: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Sphingomonas koreensis

49% id,
96% cov

Shewana3_3112: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Shewanella sp.

53% id,
87% cov

More...

AZOBR_RS22765: hydrolase
is similar to:
PaperBLAST

Sama_0946: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Shewanella amazonensis

22% id,
90% cov

SO3505: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Shewanella oneidensis

24% id,
54% cov

Shewana3_3112: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) from Shewanella sp.

24% id,
54% cov

More...

AZOBR_RS20420: adenine deaminase
is similar to:
PaperBLAST

NAGA_LYSSH / Q84F86: N-acetylglucosamine-6-phosphate deacetylase; GlcNAc 6-P deacetylase; EC 3.5.1.25 from Lysinibacillus sphaericus

31% id,
16% cov

AZOBR_RS22755: dihydropyrimidinase
is similar to:
PaperBLAST

NAGA_BACSU / O34450: N-acetylglucosamine-6-phosphate deacetylase; GlcNAc 6-P deacetylase; EC 3.5.1.25 from Bacillus subtilis
CAB15506.1: N-acetylglucosamine 6-phosphate deacetylase (NagA;BSU35010) (EC 3.5.1.25) from

29% id,
15% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory