Curated BLAST for Genomes

 

Curated BLAST

Searching in Azospirillum brasilense Sp245 (azobra)

Found 16 curated entries in PaperBLAST's database that match '3.5.2.7' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Azospirillum brasilense Sp245, or try another query

AZOBR_RS21725: imidazolonepropionase
is similar to:
PaperBLAST

Pf6N2E2_3798: Imidazolonepropionase (EC 3.5.2.7) from Pseudomonas fluorescens

66% id,
99% cov

AO356_09595: Imidazolonepropionase (EC 3.5.2.7) from Pseudomonas fluorescens

65% id,
99% cov

PfGW456L13_317: Imidazolonepropionase (EC 3.5.2.7) from Pseudomonas fluorescens

65% id,
98% cov

More...

AZOBR_RS22765: hydrolase
is similar to:
PaperBLAST

AO356_09595: Imidazolonepropionase (EC 3.5.2.7) from Pseudomonas fluorescens

29% id,
42% cov

PfGW456L13_317: Imidazolonepropionase (EC 3.5.2.7) from Pseudomonas fluorescens

29% id,
42% cov

Pf6N2E2_3798: Imidazolonepropionase (EC 3.5.2.7) from Pseudomonas fluorescens

28% id,
42% cov

More...

AZOBR_RS29650: dihydroorotase
is similar to:
PaperBLAST

Ga0059261_3964: Imidazolonepropionase (EC 3.5.2.7) from Sphingomonas koreensis

36% id,
17% cov

HUTI_BACSU / P42084: Imidazolonepropionase; Imidazolone-5-propionate hydrolase; EC 3.5.2.7 from Bacillus subtilis
P42084: imidazolonepropionase (EC 3.5.2.7) from Bacillus subtilis

37% id,
14% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

705061-707628 (frame -1) on NC_016594.1
is similar to:
PaperBLAST

HUTI_AGRFC / Q8U8Z6: Imidazolonepropionase; Imidazolone-5-propanoate hydrolase; Imidazolone-5-propionate hydrolase; EC 3.5.2.7 from Agrobacterium fabrum
Q8U8Z6: imidazolonepropionase (EC 3.5.2.7) from Agrobacterium tumefaciens
Also see hits to annotated proteins above

27% id,
32% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory