Curated BLAST for Genomes

 

Curated BLAST

Searching in Azospirillum brasilense Sp245 (azobra)

Found 65 curated entries in PaperBLAST's database that match '3.5.3.1' as complete word(s).

These curated entries have 50 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Azospirillum brasilense Sp245, or try another query

AZOBR_RS19585: arginase
is similar to:
PaperBLAST

arcA / P14012: arginase subunit (EC 3.5.3.1) from Agrobacterium fabrum

55% id,
93% cov

N515DRAFT_0348: Arginase (EC 3.5.3.1) from Dyella japonica

51% id,
98% cov

Ac3H11_701: Arginase (EC 3.5.3.1) from Acidovorax sp.

51% id,
82% cov

More...

AZOBR_RS30775: agmatinase
is similar to:
PaperBLAST

GDAH_HUMAN / Q9BSE5: Guanidino acid hydrolase, mitochondrial; Arginase, mitochondrial; Guanidinobutyrase, mitochondrial; Guanidinopropionase, mitochondrial; EC 3.5.3.-; EC 3.5.3.1; EC 3.5.3.7; EC 3.5.3.17 from Homo sapiens

43% id,
83% cov

GDAH_MOUSE / A2AS89: Guanidino acid hydrolase, mitochondrial; Arginase, mitochondrial; Guanidinobutyrase, mitochondrial; Guanidinopropionase, mitochondrial; EC 3.5.3.-; EC 3.5.3.1; EC 3.5.3.7; EC 3.5.3.17 from Mus musculus

41% id,
84% cov

ARGI_BACCD / P53608: Arginase; EC 3.5.3.1 from Bacillus caldovelox
P53608: arginase (EC 3.5.3.1) from [Bacillus] caldovelox

32% id,
96% cov

More...

AZOBR_RS30430: arginase
is similar to:
PaperBLAST

ARGI_BACCD / P53608: Arginase; EC 3.5.3.1 from Bacillus caldovelox
P53608: arginase (EC 3.5.3.1) from [Bacillus] caldovelox

24% id,
99% cov

A4IJM8: arginase (EC 3.5.3.1) from Geobacillus thermodenitrificans

24% id,
99% cov

GDAH_HUMAN / Q9BSE5: Guanidino acid hydrolase, mitochondrial; Arginase, mitochondrial; Guanidinobutyrase, mitochondrial; Guanidinopropionase, mitochondrial; EC 3.5.3.-; EC 3.5.3.1; EC 3.5.3.7; EC 3.5.3.17 from Homo sapiens

28% id,
81% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

1164435-1165457 (frame +3) on NC_016594.1
is similar to:
PaperBLAST

arcA / P14012: arginase subunit (EC 3.5.3.1) from Agrobacterium fabrum
Also see hits to annotated proteins above

53% id,
98% cov

agaA: arginase; EC 3.5.3.1 from Emericella nidulans
Also see hits to annotated proteins above

34% id,
98% cov

U6BQJ3: arginase (EC 3.5.3.1) from Heteropneustes fossilis
Also see hits to annotated proteins above

36% id,
90% cov

More...

174319-175818 (frame -2) on NC_016596.1
is similar to:
PaperBLAST

GDAH_HUMAN / Q9BSE5: Guanidino acid hydrolase, mitochondrial; Arginase, mitochondrial; Guanidinobutyrase, mitochondrial; Guanidinopropionase, mitochondrial; EC 3.5.3.-; EC 3.5.3.1; EC 3.5.3.7; EC 3.5.3.17 from Homo sapiens
Also see hits to annotated proteins above

28% id,
92% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory