Curated BLAST for Genomes

 

Curated BLAST

Searching in Azospirillum brasilense Sp245 (azobra)

Found 12 curated entries in PaperBLAST's database that match '3.5.3.7' as complete word(s).

These curated entries have 8 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Azospirillum brasilense Sp245, or try another query

AZOBR_RS30775: agmatinase
is similar to:
PaperBLAST

gbuA / Q88EE2: guanidinobutyrase subunit (EC 3.5.3.7) from Pseudomonas putida

44% id,
94% cov

GBUA_PSEAE / Q9I3S3: Guanidinobutyrase; EC 3.5.3.7 from Pseudomonas aeruginosa
gbuA / Q9I3S3: guanidinobutyrase subunit (EC 3.5.3.7) from Pseudomonas aeruginosa
Q9I3S3: guanidinobutyrase (EC 3.5.3.7) from Pseudomonas aeruginosa

43% id,
95% cov

gbuA / A0A0A1DPD5: 5-guanidino-2-oxopentanoate ureohydrolase (EC 3.5.3.7) from Nocardioides simplex

40% id,
95% cov

More...

AZOBR_RS30430: arginase
is similar to:
PaperBLAST

gbh / Q8KZT5: guanidinobutyrase subunit (EC 3.5.3.7) from Arthrobacter sp.
Q8KZT5: D-arginase (EC 3.5.3.10); guanidinobutyrase (EC 3.5.3.7) from Arthrobacter sp.

29% id,
80% cov

gbuA / A0A0A1DPD5: 5-guanidino-2-oxopentanoate ureohydrolase (EC 3.5.3.7) from Nocardioides simplex

32% id,
72% cov

GDAH_HUMAN / Q9BSE5: Guanidino acid hydrolase, mitochondrial; Arginase, mitochondrial; Guanidinobutyrase, mitochondrial; Guanidinopropionase, mitochondrial; EC 3.5.3.-; EC 3.5.3.1; EC 3.5.3.7; EC 3.5.3.17 from Homo sapiens

28% id,
81% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

174319-175818 (frame -2) on NC_016596.1
is similar to:
PaperBLAST

GDAH_HUMAN / Q9BSE5: Guanidino acid hydrolase, mitochondrial; Arginase, mitochondrial; Guanidinobutyrase, mitochondrial; Guanidinopropionase, mitochondrial; EC 3.5.3.-; EC 3.5.3.1; EC 3.5.3.7; EC 3.5.3.17 from Homo sapiens
Also see hits to annotated proteins above

28% id,
92% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory