Curated BLAST for Genomes

 

Curated BLAST

Searching in Azospirillum brasilense Sp245 (azobra)

Found 17 curated entries in PaperBLAST's database that match '3.7.1.3' as complete word(s).

These curated entries have 13 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Azospirillum brasilense Sp245, or try another query

AZOBR_RS05835: cysteine desulfarase
is similar to:
PaperBLAST

RR42_RS15385: Kynureninase (EC 3.7.1.3) from Cupriavidus basilensis

30% id,
49% cov

AZOBR_RS05385: aminotransferase class V
is similar to:
PaperBLAST

BPHYT_RS16030: Kynureninase (EC 3.7.1.3) from Burkholderia phytofirmans

21% id,
66% cov

AZOBR_RS04905: aminotransferase class V
is similar to:
PaperBLAST

BPHYT_RS16030: Kynureninase (EC 3.7.1.3) from Burkholderia phytofirmans

24% id,
48% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

1195888-1197327 (frame -2) on NC_016617.1
is similar to:
PaperBLAST

BPHYT_RS16030: Kynureninase (EC 3.7.1.3) from Burkholderia phytofirmans
Also see hits to annotated proteins above

27% id,
54% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory