Searching in Azospirillum brasilense Sp245 (azobra)
Found 22 curated entries in PaperBLAST's database that match '4.1.1.18' as complete word(s).
These curated entries have 13 distinct sequences.
Running ublast with E ≤ 0.01
Found 6 relevant proteins in Azospirillum brasilense Sp245, or try another query
| AZOBR_RS14105: LOG family protein is similar to: | PaperBLAST |
A0A2Z4EVE5: lysine decarboxylase (EC 4.1.1.18) from Morus alba | 49% id, 82% cov |
| AZOBR_RS27535: amino acid decarboxylase is similar to: | PaperBLAST |
LDCA_PSEAE / Q9I2S7: Lysine decarboxylase LdcA; EC 4.1.1.18 from Pseudomonas aeruginosa | 38% id, 99% cov |
Q9Z4R7: lysine decarboxylase (EC 4.1.1.18) from Eikenella corrodens | 33% id, 98% cov |
Q87KT6: lysine decarboxylase (EC 4.1.1.18) from Vibrio parahaemolyticus | 33% id, 97% cov |
| AZOBR_RS10990: lysine decarboxylase is similar to: | PaperBLAST |
A0A2Z4EVE5: lysine decarboxylase (EC 4.1.1.18) from Morus alba | 45% id, 73% cov |
| AZOBR_RS00105: ornithine decarboxylase is similar to: | PaperBLAST |
ldc / O50657: L-lysine decarboxylase monomer (EC 4.1.1.18) from Selenomonas ruminantium | 35% id, 92% cov |
ODC_NICGU / Q9FPK5: Ornithine decarboxylase, chloroplastic; Lysine decarboxylase; EC 4.1.1.17; EC 4.1.1.18 from Nicotiana glutinosa | 32% id, 83% cov |
| AZOBR_RS16945: diaminopimelate decarboxylase is similar to: | PaperBLAST |
A0A0H3H393: lysine decarboxylase (EC 4.1.1.18) from Klebsiella oxytoca | 33% id, 97% cov |
ldc / O50657: L-lysine decarboxylase monomer (EC 4.1.1.18) from Selenomonas ruminantium | 26% id, 93% cov |
| AZOBR_RS10225: diaminopimelate decarboxylase is similar to: | PaperBLAST |
ldc / O50657: L-lysine decarboxylase monomer (EC 4.1.1.18) from Selenomonas ruminantium | 36% id, 84% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 6 reading frames. Except for 3 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 2967834-2968457 (frame -3) on NC_016617.1 is similar to: | PaperBLAST |
A0A2Z4EVE5: lysine decarboxylase (EC 4.1.1.18) from Morus alba | 48% id, 84% cov |
| 555766-557304 (frame +1) on NC_016594.1 is similar to: | PaperBLAST |
A0A0H3H393: lysine decarboxylase (EC 4.1.1.18) from Klebsiella oxytoca | 33% id, 100% cov |
| 10334-11548 (frame +2) on NC_016617.1 is similar to: | PaperBLAST |
ldc / O50657: L-lysine decarboxylase monomer (EC 4.1.1.18) from Selenomonas ruminantium | 35% id, 93% cov |
Lawrence Berkeley National Laboratory