Searching in Azospirillum brasilense Sp245 (azobra)
Found 90 curated entries in PaperBLAST's database that match '4.1.2.4'.
These curated entries have 57 distinct sequences.
Running ublast with E ≤ 0.01
Found 11 relevant proteins in Azospirillum brasilense Sp245, or try another query
| AZOBR_RS10015: serine hydroxymethyltransferase is similar to: | PaperBLAST |
GLYA_HYDTT / D3DKC4: Serine hydroxymethyltransferase; SHMT; Serine methylase; L-threonine/L-allo-threonine aldolase; EC 2.1.2.1; EC 4.1.2.48 from Hydrogenobacter thermophilus | 61% id, 96% cov |
P0A825: low-specificity L-threonine aldolase (EC 4.1.2.48) from Escherichia coli | 59% id, 98% cov |
GLYA_METJA / Q58992: Serine hydroxymethyltransferase; SHMT; Serine methylase; L-allo-threonine aldolase; EC 2.1.2.-; EC 4.1.2.49 from Methanocaldococcus jannaschii | 38% id, 95% cov |
| AZOBR_RS16515: S-(hydroxymethyl)glutathione dehydrogenase is similar to: | PaperBLAST |
AHNL_LINUS / P93243: Aliphatic (R)-hydroxynitrile lyase; LuHNL; EC 4.1.2.46 from Linum usitatissimum | 33% id, 83% cov |
| AZOBR_RS26420: amino acid deaminase is similar to: | PaperBLAST |
DTA_ARTSP / O82872: D-threonine aldolase; EC 4.1.2.42 from Arthrobacter sp. | 30% id, 91% cov |
A0A0J9X243: D-threonine aldolase (EC 4.1.2.42) from Achromobacter xylosoxidans | 29% id, 91% cov |
| AZOBR_RS30885: fructose-bisphosphate aldolase is similar to: | PaperBLAST |
KBAY_ECOLI / P0AB74: D-tagatose-1,6-bisphosphate aldolase subunit KbaY; TBPA; TagBP aldolase; D-tagatose-bisphosphate aldolase class II; Ketose 1,6-bisphosphate aldolase class II; Tagatose-bisphosphate aldolase; EC 4.1.2.40 from Escherichia coli | 27% id, 98% cov |
KBAY_ECOLX / Q9KIP8: D-tagatose-1,6-bisphosphate aldolase subunit KbaY; TBPA; TagBP aldolase; D-tagatose-bisphosphate aldolase class II; Ketose 1,6-bisphosphate aldolase class II; Tagatose-bisphosphate aldolase; EC 4.1.2.40 from Escherichia coli | 27% id, 98% cov |
gatY / Q65EY6: D-tagatose-bisphosphate aldolase (EC 4.1.2.40) from Bacillus licheniformis | 27% id, 94% cov |
| AZOBR_RS24485: aldehyde-activating protein is similar to: | PaperBLAST |
FAEHP_METBF / Q46DY5: Bifunctional enzyme Fae/Hps; EC 4.2.1.147; EC 4.1.2.43 from Methanosarcina barkeri | 50% id, 40% cov |
FAEHP_METJA / Q58842: Bifunctional enzyme Fae/Hps; EC 4.2.1.147; EC 4.1.2.43 from Methanocaldococcus jannaschii | 31% id, 40% cov |
| AZOBR_RS12120: alcohol dehydrogenase is similar to: | PaperBLAST |
AHNL_LINUS / P93243: Aliphatic (R)-hydroxynitrile lyase; LuHNL; EC 4.1.2.46 from Linum usitatissimum | 24% id, 71% cov |
| AZOBR_RS33830: mannose-1-phosphate guanylyltransferase is similar to: | PaperBLAST |
C7E719: deoxyribose-phosphate aldolase (EC 4.1.2.4) from Paenibacillus sp. | 26% id, 50% cov |
| AZOBR_RS30190: transcriptional regulator is similar to: | PaperBLAST |
hps-phi / Q5JD63: bifunctional 3-hexulose-6-phosphate formaldehyde lyase/6-phospho-3-hexuloisomerase (EC 4.1.2.43; EC 5.3.1.27) from Thermococcus kodakarensis | 33% id, 36% cov |
| AZOBR_RS18850: arabinose 5-phosphate isomerase is similar to: | PaperBLAST |
hps-phi / Q5JD63: bifunctional 3-hexulose-6-phosphate formaldehyde lyase/6-phospho-3-hexuloisomerase (EC 4.1.2.43; EC 5.3.1.27) from Thermococcus kodakarensis | 30% id, 33% cov |
| AZOBR_RS15730: enoyl-CoA hydratase is similar to: | PaperBLAST |
BOXC_AROEV / Q84HH6: Benzoyl-CoA-dihydrodiol lyase; EC 4.1.2.44 from Aromatoleum evansii | 29% id, 28% cov |
| AZOBR_RS33910: phosphoheptose isomerase is similar to: | PaperBLAST |
hps-phi / Q5JD63: bifunctional 3-hexulose-6-phosphate formaldehyde lyase/6-phospho-3-hexuloisomerase (EC 4.1.2.43; EC 5.3.1.27) from Thermococcus kodakarensis | 31% id, 16% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 14 reading frames. Except for 5 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 1408783-1409766 (frame +1) on NC_016617.1 is similar to: | PaperBLAST |
DEOC_ECOLI / P0A6L0: Deoxyribose-phosphate aldolase; DERA; 2-deoxy-D-ribose 5-phosphate aldolase; Phosphodeoxyriboaldolase; Deoxyriboaldolase; EC 4.1.2.4 from Escherichia coli | 50% id, 98% cov |
DEOC_SALTY / Q8ZJV8: Deoxyribose-phosphate aldolase; DERA; 2-deoxy-D-ribose 5-phosphate aldolase; Phosphodeoxyriboaldolase; Deoxyriboaldolase; EC 4.1.2.4 from Salmonella typhimurium | 49% id, 98% cov |
Q7WT44: deoxyribose-phosphate aldolase (EC 4.1.2.4) from Klebsiella pneumoniae | 51% id, 95% cov |
| 2234964-2236385 (frame -3) on NC_016617.1 is similar to: | PaperBLAST |
A0T1V9: low-specificity L-threonine aldolase (EC 4.1.2.48) from Sinorhizobium arboris | 51% id, 77% cov |
O50584: low-specificity L-threonine aldolase (EC 4.1.2.48) from Pseudomonas sp. | 49% id, 76% cov |
| 352176-355583 (frame -3) on NC_016595.1 is similar to: | PaperBLAST |
nahE / P0A144: trans-o-hydroxybenzylidenepyruvate hydratase-aldolase (EC 4.1.2.45) from Pseudomonas putida | 29% id, 43% cov |
NAHE1_PSEPU / Q51947: Trans-O-hydroxybenzylidenepyruvate hydratase-aldolase; THBPA hydratase-aldolase; 2'-hydroxybenzalpyruvate aldolase; EC 4.1.2.45 from Pseudomonas putida | 32% id, 32% cov |
NSAE_SPHXE / Q9X9Q6: Trans-O-hydroxybenzylidenepyruvate hydratase-aldolase; THBPA hydratase-aldolase; 2'-hydroxybenzalpyruvate aldolase; EC 4.1.2.45 from Sphingobium xenophagum | 31% id, 31% cov |
| 281770-282588 (frame -1) on NC_016594.1 is similar to: | PaperBLAST |
BOXC_AROEV / Q84HH6: Benzoyl-CoA-dihydrodiol lyase; EC 4.1.2.44 from Aromatoleum evansii | 28% id, 33% cov |
| 2234792-2235253 (frame -1) on NC_016617.1 is similar to: | PaperBLAST |
O50584: low-specificity L-threonine aldolase (EC 4.1.2.48) from Pseudomonas sp. | 37% id, 20% cov |
Lawrence Berkeley National Laboratory