Curated BLAST for Genomes

 

Curated BLAST

Searching in Azospirillum brasilense Sp245 (azobra)

Found 3 curated entries in PaperBLAST's database that match '4.1.2.44' as complete word(s).

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Azospirillum brasilense Sp245, or try another query

AZOBR_RS15730: enoyl-CoA hydratase
is similar to:
PaperBLAST

BOXC_AROEV / Q84HH6: Benzoyl-CoA-dihydrodiol lyase; EC 4.1.2.44 from Aromatoleum evansii
boxC / Q84HH6: benzoyl-CoA-dihydrodiol lyase monomer (EC 4.1.2.44) from Aromatoleum evansii
Q84HH6: 2,3-epoxybenzoyl-CoA dihydrolase (EC 4.1.2.44) from Azoarcus evansii

29% id,
28% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

281770-282588 (frame -1) on NC_016594.1
is similar to:
PaperBLAST

BOXC_AROEV / Q84HH6: Benzoyl-CoA-dihydrodiol lyase; EC 4.1.2.44 from Aromatoleum evansii
boxC / Q84HH6: benzoyl-CoA-dihydrodiol lyase monomer (EC 4.1.2.44) from Aromatoleum evansii
Q84HH6: 2,3-epoxybenzoyl-CoA dihydrolase (EC 4.1.2.44) from Azoarcus evansii
Also see hits to annotated proteins above

28% id,
33% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory