Searching in Azospirillum brasilense Sp245 (azobra)
Found 15 curated entries in PaperBLAST's database that match '4.1.2.48' as complete word(s).
These curated entries have 10 distinct sequences.
Running ublast with E ≤ 0.01
Found 1 relevant proteins in Azospirillum brasilense Sp245, or try another query
| AZOBR_RS10015: serine hydroxymethyltransferase is similar to: | PaperBLAST |
GLYA_HYDTT / D3DKC4: Serine hydroxymethyltransferase; SHMT; Serine methylase; L-threonine/L-allo-threonine aldolase; EC 2.1.2.1; EC 4.1.2.48 from Hydrogenobacter thermophilus | 61% id, 96% cov |
P0A825: low-specificity L-threonine aldolase (EC 4.1.2.48) from Escherichia coli | 59% id, 98% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 2234964-2236385 (frame -3) on NC_016617.1 is similar to: | PaperBLAST |
A0T1V9: low-specificity L-threonine aldolase (EC 4.1.2.48) from Sinorhizobium arboris | 51% id, 77% cov |
O50584: low-specificity L-threonine aldolase (EC 4.1.2.48) from Pseudomonas sp. | 49% id, 76% cov |
| 2234792-2235253 (frame -1) on NC_016617.1 is similar to: | PaperBLAST |
O50584: low-specificity L-threonine aldolase (EC 4.1.2.48) from Pseudomonas sp. | 37% id, 20% cov |
Lawrence Berkeley National Laboratory