Curated BLAST for Genomes

 

Curated BLAST

Searching in Azospirillum brasilense Sp245 (azobra)

Found 17 curated entries in PaperBLAST's database that match '4.2.1.19' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Azospirillum brasilense Sp245, or try another query

AZOBR_RS01665: imidazoleglycerol-phosphate dehydratase
is similar to:
PaperBLAST

BPHYT_RS17700: imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) from Burkholderia phytofirmans

57% id,
100% cov

HIS7_CRYNJ / P0CO22: Imidazoleglycerol-phosphate dehydratase; IGPD; EC 4.2.1.19 from Cryptococcus neoformans

52% id,
98% cov

HIS7_MYCTU / P9WML9: Imidazoleglycerol-phosphate dehydratase; IGPD; EC 4.2.1.19 from Mycobacterium tuberculosis

49% id,
97% cov

More...

AZOBR_RS33755: D-glycero-D-manno-heptose 1 7-bisphosphate phosphatase
is similar to:
PaperBLAST

HisB / b2022: imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase (EC 4.2.1.19; EC 3.1.3.15) from Escherichia coli
hisB / P06987: imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase (EC 4.2.1.19; EC 3.1.3.15) from Escherichia coli

27% id,
41% cov

HIS7_ECO57 / Q9S5G5: Histidine biosynthesis bifunctional protein HisB; EC 3.1.3.15; EC 4.2.1.19 from Escherichia coli

27% id,
40% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory