Searching in Azospirillum brasilense Sp245 (azobra)
Found 11 curated entries in PaperBLAST's database that match '4.2.1.41' as complete word(s).
These curated entries have 9 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Azospirillum brasilense Sp245, or try another query
| AZOBR_RS08420: dihydrodipicolinate synthase is similar to: | PaperBLAST |
KDGD_ACIAD / Q6FFQ1: Probable 5-dehydro-4-deoxyglucarate dehydratase; 5-keto-4-deoxy-glucarate dehydratase; KDGDH; EC 4.2.1.41 from Acinetobacter baylyi | 30% id, 87% cov |
B7WZA5: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) from Comamonas testosteroni | 27% id, 96% cov |
BPHYT_RS24155: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) from Burkholderia phytofirmans | 28% id, 93% cov |
| AZOBR_RS23300: dihydrodipicolinate synthase is similar to: | PaperBLAST |
BPHYT_RS24155: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) from Burkholderia phytofirmans | 23% id, 96% cov |
B7WZA5: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) from Comamonas testosteroni | 23% id, 96% cov |
HSERO_RS15785: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) from Herbaspirillum seropedicae | 22% id, 96% cov |
| AZOBR_RS26680: ABC transporter permease is similar to: | PaperBLAST |
A1VMN2: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) from Polaromonas naphthalenivorans | 26% id, 87% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 1768981-1769895 (frame +1) on NC_016617.1 is similar to: | PaperBLAST |
BPHYT_RS24155: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) from Burkholderia phytofirmans | 27% id, 99% cov |
A1VMN2: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) from Polaromonas naphthalenivorans | 26% id, 99% cov |
HSERO_RS15785: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) from Herbaspirillum seropedicae | 26% id, 98% cov |
Lawrence Berkeley National Laboratory