Curated BLAST for Genomes


Curated BLAST

Searching in Azospirillum brasilense Sp245 (azobra)

Found 33 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 27 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Azospirillum brasilense Sp245, or try another query

AZOBR_RS03855: prephenate dehydratase
is similar to:

Q5NLV8: prephenate dehydratase (EC from Zymomonas mobilis

48% id,
84% cov

BT3936: prephenate and/or arogenate dehydratase (EC from Bacteroides thetaiotaomicron

34% id,
96% cov

PHEA_METJA / Q58054: Prephenate dehydratase; PDT; MjPDT; EC from Methanocaldococcus jannaschii

31% id,
99% cov


AZOBR_RS27130: polyamine ABC transporter substrate-binding protein
is similar to:

PHEC_PSEAE / Q01269: Cyclohexadienyl dehydratase; EC; EC from Pseudomonas aeruginosa

30% id,
44% cov

AZOBR_RS20480: chorismate mutase
is similar to:

CMPDT_PSEST / P27603: Bifunctional chorismate mutase/prephenate dehydratase; Chorismate mutase-prephenate dehydratase; P-protein; EC; EC from Pseudomonas stutzeri

33% id,
38% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory