Curated BLAST for Genomes


Curated BLAST

Searching in Azospirillum brasilense Sp245 (azobra)

Found 10 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 7 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Azospirillum brasilense Sp245, or try another query

AZOBR_RS15705: 2-keto-4-pentenoate hydratase
is similar to:

MHPD_COMTE / Q9S156: 2-keto-4-pentenoate hydratase; 2-hydroxypentadienoic acid hydratase; EC from Comamonas testosteroni

28% id,
90% cov

AZOBR_RS02000: 5-carboxymethyl-2-hydroxymuconate isomerase
is similar to:

cnbE / Q38M38: 2-oxopent-4-enoate hydratase (EC from Comamonas testosteroni

29% id,
36% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory