Curated BLAST for Genomes

 

Curated BLAST

Searching in Azospirillum brasilense Sp245 (azobra)

Found 7 curated entries in PaperBLAST's database that match '4.3.1.1' as complete word(s).

These curated entries have 4 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Azospirillum brasilense Sp245, or try another query

AZOBR_RS06120: fumarate hydratase
is similar to:
PaperBLAST

Q9LCC6: aspartate ammonia-lyase (EC 4.3.1.1) from Bacillus sp.

45% id,
99% cov

Q9HTD7: aspartate ammonia-lyase (EC 4.3.1.1) from Pseudomonas aeruginosa

44% id,
99% cov

Q0PC50: aspartate ammonia-lyase (EC 4.3.1.1) from Campylobacter jejuni

42% id,
99% cov

More...

AZOBR_RS28125: 3-carboxy-cis cis-muconate cycloisomerase
is similar to:
PaperBLAST

Q0PC50: aspartate ammonia-lyase (EC 4.3.1.1) from Campylobacter jejuni

22% id,
80% cov

Q9LCC6: aspartate ammonia-lyase (EC 4.3.1.1) from Bacillus sp.

22% id,
73% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory