Searching in Azospirillum brasilense Sp245 (azobra)
Found 31 curated entries in PaperBLAST's database that match '4.3.1.19' as complete word(s).
These curated entries have 21 distinct sequences.
Running ublast with E ≤ 0.01
Found 6 relevant proteins in Azospirillum brasilense Sp245, or try another query
AZOBR_RS06795: serine/threonine dehydratase is similar to: | PaperBLAST |
TDCB_ECOLI / P0AGF6: L-threonine dehydratase catabolic TdcB; L-serine dehydratase; Threonine deaminase; EC 4.3.1.19; EC 4.3.1.17 from Escherichia coli | 37% id, 100% cov |
TDCB_SALTY / P11954: L-threonine dehydratase catabolic TdcB; L-serine dehydratase; Threonine deaminase; EC 4.3.1.19; EC 4.3.1.17 from Salmonella typhimurium | 37% id, 99% cov |
TSAL_THEMA / Q9WYJ1: L-threonine ammonia-lyase; L-serine ammonia-lyase; Threonine dehydratase; EC 4.3.1.19; EC 4.3.1.17 from Thermotoga maritima | 42% id, 76% cov |
AZOBR_RS01080: cysteine synthase is similar to: | PaperBLAST |
SDSL_MOUSE / Q8R238: Serine dehydratase-like; L-serine deaminase; L-serine dehydratase/L-threonine deaminase; L-threonine dehydratase; TDH; SDH; EC 4.3.1.17; EC 4.3.1.19 from Mus musculus | 26% id, 93% cov |
SDSL_HUMAN / Q96GA7: Serine dehydratase-like; L-serine deaminase; L-serine dehydratase/L-threonine deaminase; L-threonine dehydratase; TDH; Serine dehydratase 2; SDH 2; EC 4.3.1.19; EC 4.3.1.17 from Homo sapiens | 29% id, 50% cov |
AZOBR_RS16025: threonine synthase is similar to: | PaperBLAST |
SDSL_HUMAN / Q96GA7: Serine dehydratase-like; L-serine deaminase; L-serine dehydratase/L-threonine deaminase; L-threonine dehydratase; TDH; Serine dehydratase 2; SDH 2; EC 4.3.1.19; EC 4.3.1.17 from Homo sapiens | 27% id, 83% cov |
AZOBR_RS00525: tryptophan synthase subunit beta is similar to: | PaperBLAST |
Q04513: threonine ammonia-lyase (EC 4.3.1.19) from Corynebacterium glutamicum | 26% id, 72% cov |
TSAL_GEOSL / Q74FW6: L-threonine ammonia-lyase; L-serine ammonia-lyase; Threonine/serine ammonia-lyase; EC 4.3.1.19; EC 4.3.1.17 from Geobacter sulfurreducens | 28% id, 56% cov |
AZOBR_RS07645: diaminopropionate ammonia-lyase is similar to: | PaperBLAST |
TSAL_GEOSL / Q74FW6: L-threonine ammonia-lyase; L-serine ammonia-lyase; Threonine/serine ammonia-lyase; EC 4.3.1.19; EC 4.3.1.17 from Geobacter sulfurreducens | 26% id, 54% cov |
ILVA_ECOLI / P04968: L-threonine dehydratase biosynthetic IlvA; Threonine deaminase; EC 4.3.1.19 from Escherichia coli | 26% id, 47% cov |
TD_NICAT / Q9AXU4: Threonine dehydratase; Threonine deaminase; EC 4.3.1.19 from Nicotiana attenuata | 26% id, 44% cov |
AZOBR_RS08705: cysteine synthase is similar to: | PaperBLAST |
V6QU65: threonine ammonia-lyase (EC 4.3.1.19) from Fusarium graminearum | 27% id, 46% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 10 reading frames. Except for 5 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
263398-265116 (frame -2) on NC_016596.1 is similar to: | PaperBLAST |
CCNA_03750: threonine deaminase (EC 4.3.1.19) from Caulobacter crescentus | 53% id, 70% cov |
Ga0059261_3694: threonine deaminase (EC 4.3.1.19) from Sphingomonas koreensis | 53% id, 67% cov |
TSAL_GEOSL / Q74FW6: L-threonine ammonia-lyase; L-serine ammonia-lyase; Threonine/serine ammonia-lyase; EC 4.3.1.19; EC 4.3.1.17 from Geobacter sulfurreducens | 43% id, 70% cov |
2328605-2330167 (frame -1) on NC_016617.1 is similar to: | PaperBLAST |
CCNA_03750: threonine deaminase (EC 4.3.1.19) from Caulobacter crescentus | 41% id, 84% cov |
Ga0059261_3694: threonine deaminase (EC 4.3.1.19) from Sphingomonas koreensis | 41% id, 82% cov |
TSAL_GEOSL / Q74FW6: L-threonine ammonia-lyase; L-serine ammonia-lyase; Threonine/serine ammonia-lyase; EC 4.3.1.19; EC 4.3.1.17 from Geobacter sulfurreducens | 44% id, 66% cov |
1263907-1264572 (frame -1) on NC_016594.1 is similar to: | PaperBLAST |
CCNA_03750: threonine deaminase (EC 4.3.1.19) from Caulobacter crescentus | 51% id, 53% cov |
Ga0059261_3694: threonine deaminase (EC 4.3.1.19) from Sphingomonas koreensis | 49% id, 50% cov |
TSAL_GEOSL / Q74FW6: L-threonine ammonia-lyase; L-serine ammonia-lyase; Threonine/serine ammonia-lyase; EC 4.3.1.19; EC 4.3.1.17 from Geobacter sulfurreducens | 42% id, 52% cov |
263048-264412 (frame -1) on NC_016596.1 is similar to: | PaperBLAST |
Ga0059261_3694: threonine deaminase (EC 4.3.1.19) from Sphingomonas koreensis | 51% id, 30% cov |
CCNA_03750: threonine deaminase (EC 4.3.1.19) from Caulobacter crescentus | 50% id, 31% cov |
TSAL_GEOSL / Q74FW6: L-threonine ammonia-lyase; L-serine ammonia-lyase; Threonine/serine ammonia-lyase; EC 4.3.1.19; EC 4.3.1.17 from Geobacter sulfurreducens | 38% id, 30% cov |
1608277-1609614 (frame +1) on NC_016617.1 is similar to: | PaperBLAST |
TD_NICAT / Q9AXU4: Threonine dehydratase; Threonine deaminase; EC 4.3.1.19 from Nicotiana attenuata | 25% id, 55% cov |
Lawrence Berkeley National Laboratory