Curated BLAST for Genomes

 

Curated BLAST

Searching in Azospirillum brasilense Sp245 (azobra)

Found 23 curated entries in PaperBLAST's database that match '4.3.1.3' as complete word(s).

These curated entries have 20 distinct sequences.

Running ublast with E ≤ 0.01

Found 0 relevant proteins in Azospirillum brasilense Sp245, or try another query

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

1595788-1597428 (frame -2) on NC_016617.1
is similar to:
PaperBLAST

BPHYT_RS07555: Histidine ammonia-lyase (EC 4.3.1.3) from Burkholderia phytofirmans

65% id,
98% cov

Pf6N2E2_3799: Histidine ammonia-lyase (EC 4.3.1.3) from Pseudomonas fluorescens

62% id,
100% cov

PfGW456L13_320: Histidine ammonia-lyase (EC 4.3.1.3) from Pseudomonas fluorescens

61% id,
100% cov

More...

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory