Curated BLAST for Genomes

 

Curated BLAST

Searching in Azospirillum brasilense Sp245 (azobra)

Found 19 curated entries in PaperBLAST's database that match '4.3.2.1' as complete word(s).

These curated entries have 16 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Azospirillum brasilense Sp245, or try another query

AZOBR_RS16935: argininosuccinate lyase
is similar to:
PaperBLAST

ArgH / b3960: argininosuccinate lyase (EC 4.3.2.1) from Escherichia coli
argH / P11447: argininosuccinate lyase (EC 4.3.2.1) from Escherichia coli

49% id,
99% cov

Q8DVX5: argininosuccinate lyase (EC 4.3.2.1) from Streptococcus mutans

49% id,
98% cov

ARLY_NOSP7 / Q9LAE5: Argininosuccinate lyase; ASAL; ASL; Arginosuccinase; EC 4.3.2.1 from Nostoc punctiforme
Q9LAE5: argininosuccinate lyase (EC 4.3.2.1) from Nostoc sp.

48% id,
99% cov

More...

AZOBR_RS04385: adenylosuccinate lyase
is similar to:
PaperBLAST

Echvi_3852: arginosuccinate lyase (EC 4.3.2.1) from Echinicola vietnamensis

23% id,
79% cov

AZOBR_RS28125: 3-carboxy-cis cis-muconate cycloisomerase
is similar to:
PaperBLAST

Echvi_3852: arginosuccinate lyase (EC 4.3.2.1) from Echinicola vietnamensis

24% id,
71% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory