Curated BLAST for Genomes

 

Curated BLAST

Searching in Azospirillum brasilense Sp245 (azobra)

Found 14 curated entries in PaperBLAST's database that match '5.1.1.4' as complete word(s).

These curated entries have 10 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Azospirillum brasilense Sp245, or try another query

AZOBR_RS03865: cytochrome C
is similar to:
PaperBLAST

Q4D480: proline racemase (EC 5.1.1.4) from Trypanosoma cruzi

50% id,
99% cov

AZOBR_RS25775: cytochrome C
is similar to:
PaperBLAST

Q4D480: proline racemase (EC 5.1.1.4) from Trypanosoma cruzi

54% id,
85% cov

AZOBR_RS28245: cytochrome C
is similar to:
PaperBLAST

Q4D480: proline racemase (EC 5.1.1.4) from Trypanosoma cruzi

53% id,
85% cov

AZOBR_RS12815: cytochrome C
is similar to:
PaperBLAST

Q4D480: proline racemase (EC 5.1.1.4) from Trypanosoma cruzi

49% id,
90% cov

AZOBR_RS27830: proline racemase
is similar to:
PaperBLAST

PRAC_CLODI / A8DEZ8: Proline racemase; CdPRAC; EC 5.1.1.4 from Clostridioides difficile
Q17ZY4: proline racemase (EC 5.1.1.4) from Clostridioides difficile
A8DEZ8: proline racemase (EC 5.1.1.4) from Clostridioides difficile

40% id,
100% cov

Q9L4Q3: proline racemase (EC 5.1.1.4) from Acetoanaerobium sticklandii

37% id,
100% cov

PRAC_ACESD / E3PTZ4: Proline racemase; PR; AsProR; CsPR; EC 5.1.1.4 from Acetoanaerobium sticklandii

37% id,
100% cov

More...

AZOBR_RS14870: cytochrome C transmembrane protein
is similar to:
PaperBLAST

Q4D480: proline racemase (EC 5.1.1.4) from Trypanosoma cruzi

43% id,
87% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory