Curated BLAST for Genomes

 

Curated BLAST

Searching in Azospirillum brasilense Sp245 (azobra)

Found 11 curated entries in PaperBLAST's database that match '6.2.1.16' as complete word(s).

These curated entries have 7 distinct sequences.

Running ublast with E ≤ 0.01

Found 23 relevant proteins in Azospirillum brasilense Sp245, or try another query

AZOBR_RS09405: acyl-CoA synthetase
is similar to:
PaperBLAST

Ac3H11_3009: Acetoacetate--CoA ligase (EC 6.2.1.16) from Acidovorax sp.

33% id,
97% cov

AZOBR_RS19480: acyl-CoA synthetase
is similar to:
PaperBLAST

Ac3H11_3009: Acetoacetate--CoA ligase (EC 6.2.1.16) from Acidovorax sp.

31% id,
93% cov

AACS_HUMAN / Q86V21: Acetoacetyl-CoA synthetase; Acyl-CoA synthetase family member 1; Protein sur-5 homolog; EC 6.2.1.16 from Homo sapiens
Q86V21: acetoacetate-CoA ligase (EC 6.2.1.16) from Homo sapiens

21% id,
80% cov

AACS_MOUSE / Q9D2R0: Acetoacetyl-CoA synthetase; EC 6.2.1.16 from Mus musculus
Q9D2R0: acetoacetate-CoA ligase (EC 6.2.1.16) from Mus musculus

24% id,
40% cov

More...

AZOBR_RS06255: acyl-CoA synthetase
is similar to:
PaperBLAST

Ac3H11_3009: Acetoacetate--CoA ligase (EC 6.2.1.16) from Acidovorax sp.

30% id,
96% cov

AZOBR_RS31155: AMP-dependent synthetase
is similar to:
PaperBLAST

Ac3H11_3009: Acetoacetate--CoA ligase (EC 6.2.1.16) from Acidovorax sp.

30% id,
95% cov

AZOBR_RS19340: long-chain fatty acid--CoA ligase
is similar to:
PaperBLAST

Ac3H11_3009: Acetoacetate--CoA ligase (EC 6.2.1.16) from Acidovorax sp.

30% id,
92% cov

AZOBR_RS19780: AMP-dependent synthetase
is similar to:
PaperBLAST

Ac3H11_3009: Acetoacetate--CoA ligase (EC 6.2.1.16) from Acidovorax sp.

30% id,
92% cov

AZOBR_RS26580: hypothetical protein
is similar to:
PaperBLAST

Ac3H11_3009: Acetoacetate--CoA ligase (EC 6.2.1.16) from Acidovorax sp.

28% id,
94% cov

AZOBR_RS00270: acetyl-CoA synthetase
is similar to:
PaperBLAST

AACS_RHIME / Q9Z3R3: Acetoacetyl-coenzyme A synthetase; Acetoacetyl-CoA synthetase; EC 6.2.1.16 from Rhizobium meliloti
SMc00774: Acetoacetate--CoA ligase (EC 6.2.1.16) from Sinorhizobium meliloti
Q9Z3R3: acetoacetate-CoA ligase (EC 6.2.1.16) from Sinorhizobium meliloti

28% id,
94% cov

AACS_MOUSE / Q9D2R0: Acetoacetyl-CoA synthetase; EC 6.2.1.16 from Mus musculus
Q9D2R0: acetoacetate-CoA ligase (EC 6.2.1.16) from Mus musculus

26% id,
90% cov

D6EQU8: acetoacetate-CoA ligase (EC 6.2.1.16) from Streptomyces lividans

27% id,
88% cov

More...

AZOBR_RS06340: acyl-CoA synthetase
is similar to:
PaperBLAST

D6EQU8: acetoacetate-CoA ligase (EC 6.2.1.16) from Streptomyces lividans

29% id,
92% cov

AACS_RHIME / Q9Z3R3: Acetoacetyl-coenzyme A synthetase; Acetoacetyl-CoA synthetase; EC 6.2.1.16 from Rhizobium meliloti
SMc00774: Acetoacetate--CoA ligase (EC 6.2.1.16) from Sinorhizobium meliloti
Q9Z3R3: acetoacetate-CoA ligase (EC 6.2.1.16) from Sinorhizobium meliloti

26% id,
95% cov

AACS_MOUSE / Q9D2R0: Acetoacetyl-CoA synthetase; EC 6.2.1.16 from Mus musculus
Q9D2R0: acetoacetate-CoA ligase (EC 6.2.1.16) from Mus musculus

25% id,
93% cov

More...

AZOBR_RS25670: long-chain fatty acid--CoA ligase
is similar to:
PaperBLAST

Ac3H11_3009: Acetoacetate--CoA ligase (EC 6.2.1.16) from Acidovorax sp.

28% id,
90% cov

AZOBR_RS26470: acyl-CoA synthetase
is similar to:
PaperBLAST

Ac3H11_3009: Acetoacetate--CoA ligase (EC 6.2.1.16) from Acidovorax sp.

32% id,
70% cov

AZOBR_RS22375: malonyl-CoA synthase
is similar to:
PaperBLAST

Ac3H11_3009: Acetoacetate--CoA ligase (EC 6.2.1.16) from Acidovorax sp.

33% id,
65% cov

AZOBR_RS26805: malonyl-CoA synthase
is similar to:
PaperBLAST

Ac3H11_3009: Acetoacetate--CoA ligase (EC 6.2.1.16) from Acidovorax sp.

31% id,
64% cov

Ac3H11_3009: Acetoacetate--CoA ligase (EC 6.2.1.16) from Acidovorax sp.

39% id,
12% cov

AZOBR_RS10510: amP-dependent synthetase and ligase
is similar to:
PaperBLAST

Ac3H11_3009: Acetoacetate--CoA ligase (EC 6.2.1.16) from Acidovorax sp.

33% id,
61% cov

AZOBR_RS21705: 2-aminobenzoate-CoA ligase
is similar to:
PaperBLAST

Ac3H11_3009: Acetoacetate--CoA ligase (EC 6.2.1.16) from Acidovorax sp.

30% id,
61% cov

AZOBR_RS24085: AMP-dependent synthetase
is similar to:
PaperBLAST

Ac3H11_3009: Acetoacetate--CoA ligase (EC 6.2.1.16) from Acidovorax sp.

28% id,
64% cov

D6EQU8: acetoacetate-CoA ligase (EC 6.2.1.16) from Streptomyces lividans

32% id,
26% cov

AACS_MOUSE / Q9D2R0: Acetoacetyl-CoA synthetase; EC 6.2.1.16 from Mus musculus
Q9D2R0: acetoacetate-CoA ligase (EC 6.2.1.16) from Mus musculus

31% id,
10% cov

More...

AZOBR_RS05910: AMP-dependent synthetase
is similar to:
PaperBLAST

Ac3H11_3009: Acetoacetate--CoA ligase (EC 6.2.1.16) from Acidovorax sp.

26% id,
60% cov

AZOBR_RS22355: acetyl-CoA synthetase
is similar to:
PaperBLAST

AACS_HUMAN / Q86V21: Acetoacetyl-CoA synthetase; Acyl-CoA synthetase family member 1; Protein sur-5 homolog; EC 6.2.1.16 from Homo sapiens
Q86V21: acetoacetate-CoA ligase (EC 6.2.1.16) from Homo sapiens

21% id,
67% cov

AACS_MOUSE / Q9D2R0: Acetoacetyl-CoA synthetase; EC 6.2.1.16 from Mus musculus
Q9D2R0: acetoacetate-CoA ligase (EC 6.2.1.16) from Mus musculus

26% id,
17% cov

AACS_RAT / Q9JMI1: Acetoacetyl-CoA synthetase; EC 6.2.1.16 from Rattus norvegicus

26% id,
17% cov

AZOBR_RS26275: amP-dependent synthetase and ligase
is similar to:
PaperBLAST

Ac3H11_3009: Acetoacetate--CoA ligase (EC 6.2.1.16) from Acidovorax sp.

39% id,
35% cov

AZOBR_RS29555: enterobactin synthase subunit E
is similar to:
PaperBLAST

D6EQU8: acetoacetate-CoA ligase (EC 6.2.1.16) from Streptomyces lividans

26% id,
49% cov

Ac3H11_3009: Acetoacetate--CoA ligase (EC 6.2.1.16) from Acidovorax sp.

37% id,
16% cov

AZOBR_RS25840: amino acid adenylation (fragment)
is similar to:
PaperBLAST

Ac3H11_3009: Acetoacetate--CoA ligase (EC 6.2.1.16) from Acidovorax sp.

28% id,
41% cov

Ac3H11_3009: Acetoacetate--CoA ligase (EC 6.2.1.16) from Acidovorax sp.

28% id,
35% cov

AZOBR_RS25850: putative Phenylalanine racemase (ATP-hydrolyzing)
is similar to:
PaperBLAST

Ac3H11_3009: Acetoacetate--CoA ligase (EC 6.2.1.16) from Acidovorax sp.

32% id,
34% cov

AZOBR_RS10320: peptide synthetase
is similar to:
PaperBLAST

AACS_HUMAN / Q86V21: Acetoacetyl-CoA synthetase; Acyl-CoA synthetase family member 1; Protein sur-5 homolog; EC 6.2.1.16 from Homo sapiens
Q86V21: acetoacetate-CoA ligase (EC 6.2.1.16) from Homo sapiens

25% id,
41% cov

D6EQU8: acetoacetate-CoA ligase (EC 6.2.1.16) from Streptomyces lividans

24% id,
27% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 27 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

490619-492622 (frame -3) on NC_016594.1
is similar to:
PaperBLAST

AACS_RHIME / Q9Z3R3: Acetoacetyl-coenzyme A synthetase; Acetoacetyl-CoA synthetase; EC 6.2.1.16 from Rhizobium meliloti
SMc00774: Acetoacetate--CoA ligase (EC 6.2.1.16) from Sinorhizobium meliloti
Q9Z3R3: acetoacetate-CoA ligase (EC 6.2.1.16) from Sinorhizobium meliloti
Also see hits to annotated proteins above

57% id,
100% cov

AACS_HUMAN / Q86V21: Acetoacetyl-CoA synthetase; Acyl-CoA synthetase family member 1; Protein sur-5 homolog; EC 6.2.1.16 from Homo sapiens
Q86V21: acetoacetate-CoA ligase (EC 6.2.1.16) from Homo sapiens
Also see hits to annotated proteins above

41% id,
100% cov

D6EQU8: acetoacetate-CoA ligase (EC 6.2.1.16) from Streptomyces lividans
Also see hits to annotated proteins above

42% id,
97% cov

More...

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory