Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Azospirillum brasilense Sp245 (azobra)

Found 117 curated entries in PaperBLAST's database that match '6.3.1.2' as complete word(s).

These curated entries have 85 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Azospirillum brasilense Sp245, or try another query

AZOBR_RS07095: glutamine synthetase is similar to:	PaperBLAST
GLN1B_PSETA / Q3V5W6: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I beta; GSI beta; EC 6.3.1.2 from Pseudomonas taetrolens	64% id, 100% cov
glnA: glutamate--ammonia ligase; EC 6.3.1.2 from Escherichia coli glnA / P0A9C5: glutamine synthetase (EC 6.3.1.2) from Escherichia coli	63% id, 99% cov
GLN1B_SALTY / P0A1P6: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I beta; GSI beta; EC 6.3.1.2 from Salmonella typhimurium glnA: glutamate--ammonia ligase; EC 6.3.1.2 from Salmonella enterica P0A1P6: glutamine synthetase (EC 6.3.1.2) from Salmonella enterica	63% id, 99% cov
GLN1B_NOSS1 / P00964: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I beta; GSI beta; EC 6.3.1.2 from Nostoc sp.	57% id, 100% cov
Q9RHZ1: glutamine synthetase (EC 6.3.1.2) from Trichormus azollae	57% id, 100% cov
GLN1B_SYNY3 / P77961: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I beta; GSI beta; EC 6.3.1.2 from Synechocystis sp. P77961: glutamine synthetase (EC 6.3.1.2) from Synechocystis sp.	56% id, 99% cov
GLN1B_STRCO / P15106: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I beta; GSI beta; EC 6.3.1.2 from Streptomyces coelicolor P15106: glutamine synthetase (EC 6.3.1.2) from Streptomyces coelicolor	55% id, 99% cov
GLN1B_MYCBO / P0A591: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I beta; GSI beta; EC 6.3.1.2 from Mycobacterium bovis GLN1B_MYCTU / P9WN39: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I beta; GSI beta; EC 6.3.1.2 from Mycobacterium tuberculosis P0A591: glutamine synthetase (EC 6.3.1.2) from Mycobacterium tuberculosis P9WN39: glutamine synthetase (EC 6.3.1.2) from Mycobacterium tuberculosis	53% id, 98% cov
O85177: glutamine synthetase (EC 6.3.1.2) from Amycolatopsis mediterranei	49% id, 99% cov
GLNA_SULAC / Q9HH09: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I alpha; GSI alpha; EC 6.3.1.2 from Sulfolobus acidocaldarius Q9HH09: glutamine synthetase (EC 6.3.1.2) from Sulfolobus acidocaldarius	44% id, 97% cov
GLN1A_BACSU / P12425: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I alpha; GSI alpha; EC 6.3.1.2 from Bacillus subtilis P12425: glutamine synthetase (EC 6.3.1.2) from Bacillus subtilis	41% id, 98% cov
GLNA1_METMA / Q8PY99: Glutamine synthetase; GS; Glutamate--ammonia ligase; EC 6.3.1.2 from Methanosarcina mazei Q8PY99: glutamine synthetase (EC 6.3.1.2) from Methanosarcina mazei	40% id, 97% cov
GLNA_ARCFU / O29313: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I alpha; GSI alpha; EC 6.3.1.2 from Archaeoglobus fulgidus O29313: glutamine synthetase (EC 6.3.1.2) from Archaeoglobus fulgidus	39% id, 98% cov
GLNA_METJA / Q60182: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I alpha; GSI alpha; EC 6.3.1.2 from Methanocaldococcus jannaschii Q60182: glutamine synthetase (EC 6.3.1.2) from Methanocaldococcus jannaschii	39% id, 96% cov
GLNA3_HALMT / I3R176: Glutamine synthetase 3; GS3; Glutamate--ammonia ligase; EC 6.3.1.2 from Haloferax mediterranei B8ZJH0: glutamine synthetase (EC 6.3.1.2) from Haloferax mediterranei	39% id, 92% cov
Q0E5H7: glutamine synthetase (EC 6.3.1.2) from Halobacillus halophilus	38% id, 93% cov
P64246: glutamine synthetase (EC 6.3.1.2) from Mycobacterium tuberculosis	34% id, 100% cov
P36687: glutamine synthetase (EC 6.3.1.2) from Pyrococcus woesei	47% id, 65% cov
P36205: glutamine synthetase (EC 6.3.1.2) from Thermotoga maritima	45% id, 65% cov
GLNA_THEKO / O08467: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I alpha; GSI alpha; EC 6.3.1.2 from Thermococcus kodakarensis O08467: glutamine synthetase (EC 6.3.1.2) from Pyrococcus sp.	45% id, 65% cov
C4L2T5: glutamine synthetase (EC 6.3.1.2) from Exiguobacterium sp.	43% id, 65% cov
F2RM17: glutamine synthetase (EC 6.3.1.2) from Haloferax mediterranei	29% id, 94% cov
GLNA3_RHIME / O87393: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase III; GSIII; EC 6.3.1.2 from Rhizobium meliloti	28% id, 94% cov
GLNA_THET8 / Q5SIP0: Glutamine synthetase; GS; Glutamate--ammonia ligase; EC 6.3.1.2 from Thermus thermophilus	46% id, 56% cov
Q86ZU6: glutamine synthetase (EC 6.3.1.2) from Tuber borchii	26% id, 83% cov
glnA: glutamine synthetase; EC 6.3.1.2 from Emericella nidulans	26% id, 82% cov
Q1MXG4: glutamine synthetase (EC 6.3.1.2) from Enchytraeus japonensis	25% id, 83% cov
gln1 / RF\|NP_593400.1: glutamate-ammonia ligase Gln1; EC 6.3.1.2 from Schizosaccharomyces pombe	24% id, 80% cov
O07752: glutamine synthetase (EC 6.3.1.2) from Mycobacterium tuberculosis	26% id, 68% cov
O33342: glutamine synthetase (EC 6.3.1.2) from Mycobacterium tuberculosis	30% id, 55% cov
Q86EI1: glutamine synthetase (EC 6.3.1.2) from Schistosoma japonicum	26% id, 51% cov
C4L2T5: glutamine synthetase (EC 6.3.1.2) from Exiguobacterium sp.	36% id, 34% cov
P36205: glutamine synthetase (EC 6.3.1.2) from Thermotoga maritima	37% id, 30% cov
P36687: glutamine synthetase (EC 6.3.1.2) from Pyrococcus woesei	34% id, 31% cov
GLNA_THEKO / O08467: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I alpha; GSI alpha; EC 6.3.1.2 from Thermococcus kodakarensis O08467: glutamine synthetase (EC 6.3.1.2) from Pyrococcus sp.	35% id, 26% cov
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AZOBR_RS08850: glutamine synthetase is similar to:	PaperBLAST
O33342: glutamine synthetase (EC 6.3.1.2) from Mycobacterium tuberculosis	33% id, 96% cov
GLNA_THET8 / Q5SIP0: Glutamine synthetase; GS; Glutamate--ammonia ligase; EC 6.3.1.2 from Thermus thermophilus	31% id, 99% cov
Q0E5H7: glutamine synthetase (EC 6.3.1.2) from Halobacillus halophilus	30% id, 100% cov
P36687: glutamine synthetase (EC 6.3.1.2) from Pyrococcus woesei	30% id, 97% cov
GLNA_THEKO / O08467: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I alpha; GSI alpha; EC 6.3.1.2 from Thermococcus kodakarensis O08467: glutamine synthetase (EC 6.3.1.2) from Pyrococcus sp.	32% id, 89% cov
GLN1A_BACSU / P12425: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I alpha; GSI alpha; EC 6.3.1.2 from Bacillus subtilis P12425: glutamine synthetase (EC 6.3.1.2) from Bacillus subtilis	29% id, 98% cov
P64246: glutamine synthetase (EC 6.3.1.2) from Mycobacterium tuberculosis	33% id, 86% cov
GLNA1_METMA / Q8PY99: Glutamine synthetase; GS; Glutamate--ammonia ligase; EC 6.3.1.2 from Methanosarcina mazei Q8PY99: glutamine synthetase (EC 6.3.1.2) from Methanosarcina mazei	29% id, 96% cov
C4L2T5: glutamine synthetase (EC 6.3.1.2) from Exiguobacterium sp.	33% id, 85% cov
GLNA_METJA / Q60182: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I alpha; GSI alpha; EC 6.3.1.2 from Methanocaldococcus jannaschii Q60182: glutamine synthetase (EC 6.3.1.2) from Methanocaldococcus jannaschii	28% id, 97% cov
GLNA3_HALMT / I3R176: Glutamine synthetase 3; GS3; Glutamate--ammonia ligase; EC 6.3.1.2 from Haloferax mediterranei B8ZJH0: glutamine synthetase (EC 6.3.1.2) from Haloferax mediterranei	29% id, 95% cov
GLNA_SULAC / Q9HH09: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I alpha; GSI alpha; EC 6.3.1.2 from Sulfolobus acidocaldarius Q9HH09: glutamine synthetase (EC 6.3.1.2) from Sulfolobus acidocaldarius	28% id, 93% cov
P36205: glutamine synthetase (EC 6.3.1.2) from Thermotoga maritima	29% id, 86% cov
GLN1B_PSETA / Q3V5W6: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I beta; GSI beta; EC 6.3.1.2 from Pseudomonas taetrolens	28% id, 83% cov
GLN1B_NOSS1 / P00964: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I beta; GSI beta; EC 6.3.1.2 from Nostoc sp.	27% id, 85% cov
GLN1B_STRCO / P15106: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I beta; GSI beta; EC 6.3.1.2 from Streptomyces coelicolor P15106: glutamine synthetase (EC 6.3.1.2) from Streptomyces coelicolor	30% id, 74% cov
GLN1B_SYNY3 / P77961: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I beta; GSI beta; EC 6.3.1.2 from Synechocystis sp. P77961: glutamine synthetase (EC 6.3.1.2) from Synechocystis sp.	29% id, 72% cov
Q9RHZ1: glutamine synthetase (EC 6.3.1.2) from Trichormus azollae	28% id, 72% cov
GLNA_ARCFU / O29313: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I alpha; GSI alpha; EC 6.3.1.2 from Archaeoglobus fulgidus O29313: glutamine synthetase (EC 6.3.1.2) from Archaeoglobus fulgidus	36% id, 56% cov
glnA: glutamate--ammonia ligase; EC 6.3.1.2 from Escherichia coli glnA / P0A9C5: glutamine synthetase (EC 6.3.1.2) from Escherichia coli	29% id, 58% cov
GLN1B_SALTY / P0A1P6: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I beta; GSI beta; EC 6.3.1.2 from Salmonella typhimurium glnA: glutamate--ammonia ligase; EC 6.3.1.2 from Salmonella enterica P0A1P6: glutamine synthetase (EC 6.3.1.2) from Salmonella enterica	32% id, 52% cov
O85177: glutamine synthetase (EC 6.3.1.2) from Amycolatopsis mediterranei	33% id, 48% cov
GLN1B_MYCBO / P0A591: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I beta; GSI beta; EC 6.3.1.2 from Mycobacterium bovis GLN1B_MYCTU / P9WN39: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I beta; GSI beta; EC 6.3.1.2 from Mycobacterium tuberculosis P0A591: glutamine synthetase (EC 6.3.1.2) from Mycobacterium tuberculosis P9WN39: glutamine synthetase (EC 6.3.1.2) from Mycobacterium tuberculosis	34% id, 45% cov
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The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

1852055-1853569 (frame -1) on NC_016617.1 is similar to:	PaperBLAST
O33342: glutamine synthetase (EC 6.3.1.2) from Mycobacterium tuberculosis Also see hits to annotated proteins above	32% id, 98% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory