Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Azospirillum brasilense Sp245 (azobra)

Found 39 curated entries in PaperBLAST's database that match '6.3.5.4' as complete word(s).

These curated entries have 33 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Azospirillum brasilense Sp245, or try another query

AZOBR_RS22535: asparagine synthase is similar to:	PaperBLAST
asnO / GI\|1934835: asparagine synthase (glutamine-hydrolysing) 3; EC 6.3.5.4 from Bacillus subtilis	32% id, 98% cov
B3KYI2: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Phaseolus vulgaris	27% id, 90% cov
ASNS2_ARATH / Q9LV77: Asparagine synthetase [glutamine-hydrolyzing] 2; Glutamine-dependent asparagine synthetase 2; EC 6.3.5.4 from Arabidopsis thaliana	28% id, 84% cov
asnB / GB\|CAB15032.1: asparagine synthase (glutamine-hydrolysing) 1; EC 6.3.5.4 from Bacillus subtilis	37% id, 60% cov
ASNH_MYCBO / P64248: Putative asparagine synthetase [glutamine-hydrolyzing]; EC 6.3.5.4 from Mycobacterium bovis	35% id, 62% cov
Q9SP19: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Helianthus annuus	31% id, 64% cov
ASNS_MOUSE / Q61024: Asparagine synthetase [glutamine-hydrolyzing]; Glutamine-dependent asparagine synthetase; EC 6.3.5.4 from Mus musculus	27% id, 73% cov
ASNS_HUMAN / P08243: Asparagine synthetase [glutamine-hydrolyzing]; Cell cycle control protein TS11; Glutamine-dependent asparagine synthetase; EC 6.3.5.4 from Homo sapiens P08243: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Homo sapiens	27% id, 73% cov
Asns / P49088: asparagine synthetase subunit (EC 6.3.5.4) from Rattus norvegicus	26% id, 73% cov
Q14SM9: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Glycine max	31% id, 62% cov
ASNS2_ORYSJ / Q43011: Asparagine synthetase [glutamine-hydrolyzing] 2; Glutamine-dependent asparagine synthetase 2; EC 6.3.5.4 from Oryza sativa Q43011: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Oryza sativa	31% id, 60% cov
F2CQ60: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Hordeum vulgare	31% id, 60% cov
F2DJ31: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Hordeum vulgare	30% id, 60% cov
A9XS73: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Phaseolus vulgaris	28% id, 55% cov
F2DDF6: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Hordeum vulgare	26% id, 56% cov
A0A1D5YL35: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Triticum aestivum	26% id, 55% cov
F2CWZ7: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Hordeum vulgare	28% id, 49% cov
Q84LA5: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Hordeum vulgare	28% id, 49% cov
Q93XP9: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Hordeum vulgare	26% id, 52% cov
A0A1D5VHV8: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Triticum aestivum	28% id, 49% cov
Q9LKQ9: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Helianthus annuus	28% id, 48% cov
ASNS_SCHPO / P78753: Probable asparagine synthetase [glutamine-hydrolyzing]; Glutamine-dependent asparagine synthetase; EC 6.3.5.4 from Schizosaccharomyces pombe asn1 / RF\|NP_595291.1: asparagine synthetase; EC 6.3.5.4 from Schizosaccharomyces pombe	31% id, 43% cov
ASNB_ECOLI / P22106: Asparagine synthetase B [glutamine-hydrolyzing]; AS-B; EC 6.3.5.4 from Escherichia coli AsnB / b0674: asparagine synthetase B (EC 6.3.5.4; EC 6.3.1.1; EC 3.5.1.38; EC 3.5.1.2) from Escherichia coli asnB: asparagine synthetase B, glutamine-hydrolyzing; EC 6.3.5.4 from Escherichia coli asnB / P22106: asparagine synthetase B (EC 6.3.5.4; EC 6.3.1.1; EC 3.5.1.38) from Escherichia coli	26% id, 45% cov
ASNB_ECOLI / P22106: Asparagine synthetase B [glutamine-hydrolyzing]; AS-B; EC 6.3.5.4 from Escherichia coli AsnB / b0674: asparagine synthetase B (EC 6.3.5.4; EC 6.3.1.1; EC 3.5.1.38; EC 3.5.1.2) from Escherichia coli asnB: asparagine synthetase B, glutamine-hydrolyzing; EC 6.3.5.4 from Escherichia coli asnB / P22106: asparagine synthetase B (EC 6.3.5.4; EC 6.3.1.1; EC 3.5.1.38) from Escherichia coli	36% id, 33% cov
Q10MX3: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Oryza sativa	27% id, 42% cov
F2DDF6: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Hordeum vulgare	33% id, 35% cov
Q2L9S5: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Bombyx mori	26% id, 43% cov
Q9SP20: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Helianthus annuus	27% id, 40% cov
ASNB_ECOLI / P22106: Asparagine synthetase B [glutamine-hydrolyzing]; AS-B; EC 6.3.5.4 from Escherichia coli AsnB / b0674: asparagine synthetase B (EC 6.3.5.4; EC 6.3.1.1; EC 3.5.1.38; EC 3.5.1.2) from Escherichia coli asnB: asparagine synthetase B, glutamine-hydrolyzing; EC 6.3.5.4 from Escherichia coli asnB / P22106: asparagine synthetase B (EC 6.3.5.4; EC 6.3.1.1; EC 3.5.1.38) from Escherichia coli	25% id, 41% cov
Q9SM55: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Phaseolus vulgaris	30% id, 34% cov
E7EAQ2: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Pinus pinaster	30% id, 32% cov
Q6HA26: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Pinus sylvestris	30% id, 32% cov
ASNS2_YEAST / P49090: Asparagine synthetase [glutamine-hydrolyzing] 2; Glutamine-dependent asparagine synthetase 2; EC 6.3.5.4 from Saccharomyces cerevisiae	25% id, 38% cov
D9IXC8: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Pinus pinaster	30% id, 31% cov
ASNS1_ARATH / P49078: Asparagine synthetase [glutamine-hydrolyzing] 1; Glutamine-dependent asparagine synthetase 1; Protein DARK INDUCIBLE 6; EC 6.3.5.4 from Arabidopsis thaliana	32% id, 28% cov
asnB / GB\|CAB15032.1: asparagine synthase (glutamine-hydrolysing) 1; EC 6.3.5.4 from Bacillus subtilis	29% id, 29% cov
Q10MX3: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Oryza sativa	31% id, 27% cov
ASNS2_YEAST / P49090: Asparagine synthetase [glutamine-hydrolyzing] 2; Glutamine-dependent asparagine synthetase 2; EC 6.3.5.4 from Saccharomyces cerevisiae	31% id, 26% cov
Q10MX3: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Oryza sativa	28% id, 26% cov
ASNS_SCHPO / P78753: Probable asparagine synthetase [glutamine-hydrolyzing]; Glutamine-dependent asparagine synthetase; EC 6.3.5.4 from Schizosaccharomyces pombe asn1 / RF\|NP_595291.1: asparagine synthetase; EC 6.3.5.4 from Schizosaccharomyces pombe	38% id, 16% cov
Q9SP19: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Helianthus annuus	38% id, 13% cov
Q9SM55: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Phaseolus vulgaris	39% id, 12% cov
F2DJ31: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Hordeum vulgare	39% id, 12% cov
F2CQ60: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Hordeum vulgare	39% id, 12% cov
Q6HA26: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Pinus sylvestris	39% id, 12% cov
ASNS1_ARATH / P49078: Asparagine synthetase [glutamine-hydrolyzing] 1; Glutamine-dependent asparagine synthetase 1; Protein DARK INDUCIBLE 6; EC 6.3.5.4 from Arabidopsis thaliana	38% id, 12% cov
D9IXC8: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Pinus pinaster	38% id, 12% cov
ASNS2_ORYSJ / Q43011: Asparagine synthetase [glutamine-hydrolyzing] 2; Glutamine-dependent asparagine synthetase 2; EC 6.3.5.4 from Oryza sativa Q43011: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Oryza sativa	38% id, 12% cov
Q14SM9: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Glycine max	36% id, 13% cov
More...

AZOBR_RS09675: glucosamine--fructose-6-phosphate aminotransferase is similar to:	PaperBLAST
asnB / GB\|CAB15032.1: asparagine synthase (glutamine-hydrolysing) 1; EC 6.3.5.4 from Bacillus subtilis	32% id, 20% cov
Q9SP20: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Helianthus annuus	32% id, 16% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. Except for 3 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

1106494-1108701 (frame -1) on NC_016594.1 is similar to:	PaperBLAST
ASNH_MYCBO / P64248: Putative asparagine synthetase [glutamine-hydrolyzing]; EC 6.3.5.4 from Mycobacterium bovis Also see hits to annotated proteins above	31% id, 98% cov
asnB / GB\|CAB15032.1: asparagine synthase (glutamine-hydrolysing) 1; EC 6.3.5.4 from Bacillus subtilis Also see hits to annotated proteins above	31% id, 91% cov
Q2L9S5: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Bombyx mori Also see hits to annotated proteins above	32% id, 72% cov
A0A1D5VHV8: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Triticum aestivum Also see hits to annotated proteins above	30% id, 76% cov
A0A1D5YL35: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Triticum aestivum Also see hits to annotated proteins above	30% id, 76% cov
Q14SM9: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Glycine max Also see hits to annotated proteins above	32% id, 69% cov
F2CWZ7: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Hordeum vulgare Also see hits to annotated proteins above	31% id, 67% cov
Q9SM55: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Phaseolus vulgaris Also see hits to annotated proteins above	31% id, 67% cov
Q84LA5: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Hordeum vulgare Also see hits to annotated proteins above	31% id, 67% cov
Q10MX3: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Oryza sativa Also see hits to annotated proteins above	31% id, 65% cov
D9IXC8: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Pinus pinaster Also see hits to annotated proteins above	27% id, 52% cov
E7EAQ2: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Pinus pinaster Also see hits to annotated proteins above	30% id, 43% cov
Q6HA26: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Pinus sylvestris Also see hits to annotated proteins above	29% id, 43% cov
ASNS1_ARATH / P49078: Asparagine synthetase [glutamine-hydrolyzing] 1; Glutamine-dependent asparagine synthetase 1; Protein DARK INDUCIBLE 6; EC 6.3.5.4 from Arabidopsis thaliana Also see hits to annotated proteins above	32% id, 39% cov
D9IXC8: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Pinus pinaster Also see hits to annotated proteins above	41% id, 28% cov
E7EAQ2: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Pinus pinaster Also see hits to annotated proteins above	41% id, 28% cov
Q6HA26: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Pinus sylvestris Also see hits to annotated proteins above	41% id, 28% cov
ASNS_SCHPO / P78753: Probable asparagine synthetase [glutamine-hydrolyzing]; Glutamine-dependent asparagine synthetase; EC 6.3.5.4 from Schizosaccharomyces pombe asn1 / RF\|NP_595291.1: asparagine synthetase; EC 6.3.5.4 from Schizosaccharomyces pombe Also see hits to annotated proteins above	38% id, 30% cov
Q9SP20: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Helianthus annuus Also see hits to annotated proteins above	40% id, 28% cov
A9XS73: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Phaseolus vulgaris Also see hits to annotated proteins above	39% id, 28% cov
ASNS1_ARATH / P49078: Asparagine synthetase [glutamine-hydrolyzing] 1; Glutamine-dependent asparagine synthetase 1; Protein DARK INDUCIBLE 6; EC 6.3.5.4 from Arabidopsis thaliana Also see hits to annotated proteins above	39% id, 28% cov
Q9SM55: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Phaseolus vulgaris Also see hits to annotated proteins above	38% id, 29% cov
Q93XP9: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Hordeum vulgare Also see hits to annotated proteins above	37% id, 28% cov
ASNS2_YEAST / P49090: Asparagine synthetase [glutamine-hydrolyzing] 2; Glutamine-dependent asparagine synthetase 2; EC 6.3.5.4 from Saccharomyces cerevisiae Also see hits to annotated proteins above	34% id, 29% cov
Q9LKQ9: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Helianthus annuus Also see hits to annotated proteins above	37% id, 25% cov
More...

1904150-1906396 (frame +2) on NC_016617.1 is similar to:	PaperBLAST
ASNH_MYCBO / P64248: Putative asparagine synthetase [glutamine-hydrolyzing]; EC 6.3.5.4 from Mycobacterium bovis Also see hits to annotated proteins above	39% id, 65% cov
asnB / GB\|CAB15032.1: asparagine synthase (glutamine-hydrolysing) 1; EC 6.3.5.4 from Bacillus subtilis Also see hits to annotated proteins above	37% id, 67% cov
ASNS_SCHPO / P78753: Probable asparagine synthetase [glutamine-hydrolyzing]; Glutamine-dependent asparagine synthetase; EC 6.3.5.4 from Schizosaccharomyces pombe asn1 / RF\|NP_595291.1: asparagine synthetase; EC 6.3.5.4 from Schizosaccharomyces pombe Also see hits to annotated proteins above	27% id, 52% cov
Q9SP20: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Helianthus annuus Also see hits to annotated proteins above	36% id, 28% cov
More...

1905519-1906253 (frame +3) on NC_016617.1 is similar to:	PaperBLAST
ASNH_MYCBO / P64248: Putative asparagine synthetase [glutamine-hydrolyzing]; EC 6.3.5.4 from Mycobacterium bovis Also see hits to annotated proteins above	40% id, 23% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory