Curated BLAST for Genomes

 

Curated BLAST

Searching in Azospirillum brasilense Sp245 (azobra)

Found 28 curated entries in PaperBLAST's database that match 'cystathionine gamma-lyase' as complete word(s).

These curated entries have 25 distinct sequences.

Running ublast with E ≤ 0.01

Found 8 relevant proteins in Azospirillum brasilense Sp245, or try another query

AZOBR_RS01080: cysteine synthase
is similar to:		 PaperBLAST

CGL_ARATH / F4K5T2: Bifunctional cystathionine gamma-lyase/cysteine synthase; Beta-substituted Ala synthase 4;3; ARAth-Bsas4;3; L-cysteine desulfhydrase 1; DES1; O-acetylserine (thiol)-lyase; OASTL; Protein CS-LIKE; EC 2.5.1.47; EC 4.4.1.1 from Arabidopsis thaliana

 50% id,
97% cov

AZOBR_RS02140: O-succinylhomoserine sulfhydrylase
is similar to:		 PaperBLAST

6k1lA / B4SII9: E53a mutant of a putative cystathionine gamma-lyase

 38% id,
97% cov

Q5H4T8: cystathionine gamma-lyase (EC 4.4.1.1) from Xanthomonas oryzae

 37% id,
99% cov

metB / P56069: cystathionine gamma-lyase (EC 4.4.1.1) from Helicobacter pylori

 36% id,
100% cov

More...

AZOBR_RS08705: cysteine synthase
is similar to:		 PaperBLAST

CGL_ARATH / F4K5T2: Bifunctional cystathionine gamma-lyase/cysteine synthase; Beta-substituted Ala synthase 4;3; ARAth-Bsas4;3; L-cysteine desulfhydrase 1; DES1; O-acetylserine (thiol)-lyase; OASTL; Protein CS-LIKE; EC 2.5.1.47; EC 4.4.1.1 from Arabidopsis thaliana

 39% id,
95% cov

AZOBR_RS08650: cystathionine beta-lyase
is similar to:		 PaperBLAST

metB / P56069: cystathionine gamma-lyase (EC 4.4.1.1) from Helicobacter pylori

 36% id,
99% cov

6k1lA / B4SII9: E53a mutant of a putative cystathionine gamma-lyase

 36% id,
98% cov

7d7oB / Q818A3: Crystal structure of cystathionine gamma-lyase from bacillus cereus atcc 14579

 34% id,
100% cov

More...

AZOBR_RS07765: O-acetylhomoserine aminocarboxypropyltransferase
is similar to:		 PaperBLAST

7ba4A / A0A509J8D5: Structure of cystathionine gamma-lyase from pseudomonas aeruginosa

 36% id,
97% cov

6ldoA / F9UT53: Crystal structure of cystathionine gamma-lyase from lactobacillus plantarum complexed with l-serine

 34% id,
98% cov

CGL_DICDI / Q55DV9: Cystathionine gamma-lyase; CGL; CSE; Cysteine desulfhydrase; Cysteine-protein sulfhydrase; Gamma-cystathionase; Homocysteine desulfhydrase; EC 4.4.1.1; EC 4.4.1.2 from Dictyostelium discoideum

 33% id,
99% cov

More...

AZOBR_RS11340: O-acetylhomoserine aminocarboxypropyltransferase
is similar to:		 PaperBLAST

Q5H4T8: cystathionine gamma-lyase (EC 4.4.1.1) from Xanthomonas oryzae

 36% id,
96% cov

6k1lA / B4SII9: E53a mutant of a putative cystathionine gamma-lyase

 42% id,
56% cov

A2RM21: cystathionine gamma-lyase (EC 4.4.1.1); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Lactococcus lactis

 40% id,
54% cov

More...

AZOBR_RS05385: aminotransferase class V
is similar to:		 PaperBLAST

Q9M1R1: cystathionine gamma-lyase (EC 4.4.1.1) from Arabidopsis thaliana

 23% id,
75% cov

AZOBR_RS24065: aspartate aminotransferase
is similar to:		 PaperBLAST

6ldoA / F9UT53: Crystal structure of cystathionine gamma-lyase from lactobacillus plantarum complexed with l-serine

 29% id,
54% cov

B3TNN9: cystathionine gamma-lyase (subunit 1/2) (EC 4.4.1.1); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Lacticaseibacillus casei

 27% id,
28% cov

B3TNN8: cystathionine gamma-lyase (subunit 2/2) (EC 4.4.1.1); cysteine-S-conjugate beta-lyase (EC 4.4.1.13) from Lacticaseibacillus casei

 28% id,
27% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory