Searching in Pseudomonas stutzeri RCH2 (psRCH2)
Found 6 curated entries in PaperBLAST's database that match '1.1.1.175' as complete word(s).
These curated entries have 3 distinct sequences.
Running ublast with E ≤ 0.01
Found 10 relevant proteins in Pseudomonas stutzeri RCH2, or try another query
| Psest_2358: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) is similar to: | PaperBLAST |
Ga0059261_1894: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Sphingomonas koreensis | 36% id, 93% cov |
XDH_CAUVC / Q9A9Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides | 33% id, 92% cov |
| Psest_1688: 3-oxoacyl-(acyl-carrier-protein) reductase is similar to: | PaperBLAST |
XDH_CAUVC / Q9A9Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides | 33% id, 96% cov |
Ga0059261_1894: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Sphingomonas koreensis | 32% id, 94% cov |
| Psest_1716: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) is similar to: | PaperBLAST |
Ga0059261_1894: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Sphingomonas koreensis | 34% id, 94% cov |
| Psest_2148: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) is similar to: | PaperBLAST |
Ga0059261_1894: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Sphingomonas koreensis | 32% id, 94% cov |
XDH_CAUVC / Q9A9Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides | 31% id, 96% cov |
| Psest_2081: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) is similar to: | PaperBLAST |
Ga0059261_1894: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Sphingomonas koreensis | 31% id, 94% cov |
| Psest_2357: Short-chain dehydrogenases of various substrate specificities is similar to: | PaperBLAST |
Ga0059261_1894: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Sphingomonas koreensis | 31% id, 93% cov |
| Psest_2594: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) is similar to: | PaperBLAST |
Ga0059261_1894: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Sphingomonas koreensis | 31% id, 92% cov |
XDH_CAUVC / Q9A9Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides | 31% id, 91% cov |
| Psest_1147: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) is similar to: | PaperBLAST |
XDH_CAUVC / Q9A9Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides | 29% id, 97% cov |
Ga0059261_1894: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Sphingomonas koreensis | 30% id, 95% cov |
| Psest_1449: Short-chain dehydrogenases of various substrate specificities is similar to: | PaperBLAST |
Ga0059261_1894: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Sphingomonas koreensis | 27% id, 88% cov |
XDH_CAUVC / Q9A9Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides | 31% id, 75% cov |
| Psest_0588: Short-chain dehydrogenases of various substrate specificities is similar to: | PaperBLAST |
XDH_CAUVC / Q9A9Z0: D-xylose 1-dehydrogenase; XDH; EC 1.1.1.175 from Caulobacter vibrioides | 27% id, 75% cov |
Ga0059261_1894: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Sphingomonas koreensis | 27% id, 73% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 12 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 2512808-2514043 (frame +2) on Psest_Contig47.1 is similar to: | PaperBLAST |
Ga0059261_1894: D-xylose 1-dehydrogenase (EC 1.1.1.175) from Sphingomonas koreensis | 35% id, 99% cov |
Lawrence Berkeley National Laboratory