Searching in Pseudomonas stutzeri RCH2 (psRCH2)
Found 76 curated entries in PaperBLAST's database that match '1.1.1.27' as complete word(s).
These curated entries have 63 distinct sequences.
Running ublast with E ≤ 0.01
Found 8 relevant proteins in Pseudomonas stutzeri RCH2, or try another query
| Psest_0954: Fe-S oxidoreductase is similar to: | PaperBLAST |
Q5F885: L-lactate dehydrogenase (subunit 3/3) (EC 1.1.1.27) from Neisseria gonorrhoeae | 58% id, 97% cov |
lutA / O07020: iron-sulfur oxidase subunit used in L-lactate utilization (EC 1.1.1.27) from Bacillus subtilis | 44% id, 100% cov |
| Psest_0953: iron-sulfur cluster-binding protein is similar to: | PaperBLAST |
Q5F883: L-lactate dehydrogenase (subunit 1/3) (EC 1.1.1.27) from Neisseria gonorrhoeae | 57% id, 97% cov |
lutB / O07021: component of an iron-sulfur oxidase linked to L-lactate utilization (EC 1.1.1.27) from Bacillus subtilis | 38% id, 94% cov |
Q5F884: L-lactate dehydrogenase (subunit 2/3) (EC 1.1.1.27) from Neisseria gonorrhoeae | 25% id, 61% cov |
| Psest_0952: Uncharacterized conserved protein is similar to: | PaperBLAST |
Q5F884: L-lactate dehydrogenase (subunit 2/3) (EC 1.1.1.27) from Neisseria gonorrhoeae | 40% id, 94% cov |
lutC / O32259: component of an iron-sulfur oxidase for L-lactate utilization (EC 1.1.1.27) from Bacillus subtilis | 26% id, 81% cov |
| Psest_3839: Fe-S oxidoreductase is similar to: | PaperBLAST |
Q5F885: L-lactate dehydrogenase (subunit 3/3) (EC 1.1.1.27) from Neisseria gonorrhoeae | 23% id, 80% cov |
| Psest_0672: Alcohol dehydrogenase, class IV is similar to: | PaperBLAST |
I3VSF1: alcohol dehydrogenase (EC 1.1.1.1); L-lactate dehydrogenase (EC 1.1.1.27); acetaldehyde dehydrogenase (acetylating) (EC 1.2.1.10) from Thermoanaerobacterium saccharolyticum | 38% id, 44% cov |
| Psest_3782: Alcohol dehydrogenase, class IV is similar to: | PaperBLAST |
I3VSF1: alcohol dehydrogenase (EC 1.1.1.1); L-lactate dehydrogenase (EC 1.1.1.27); acetaldehyde dehydrogenase (acetylating) (EC 1.2.1.10) from Thermoanaerobacterium saccharolyticum | 36% id, 47% cov |
| Psest_2268: Alcohol dehydrogenase, class IV is similar to: | PaperBLAST |
I3VSF1: alcohol dehydrogenase (EC 1.1.1.1); L-lactate dehydrogenase (EC 1.1.1.27); acetaldehyde dehydrogenase (acetylating) (EC 1.2.1.10) from Thermoanaerobacterium saccharolyticum | 31% id, 46% cov |
| Psest_3967: Alcohol dehydrogenase, class IV is similar to: | PaperBLAST |
I3VSF1: alcohol dehydrogenase (EC 1.1.1.1); L-lactate dehydrogenase (EC 1.1.1.27); acetaldehyde dehydrogenase (acetylating) (EC 1.2.1.10) from Thermoanaerobacterium saccharolyticum | 37% id, 32% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 8 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 3951762-3952988 (frame -2) on Psest_Contig47.1 is similar to: | PaperBLAST |
I3VSF1: alcohol dehydrogenase (EC 1.1.1.1); L-lactate dehydrogenase (EC 1.1.1.27); acetaldehyde dehydrogenase (acetylating) (EC 1.2.1.10) from Thermoanaerobacterium saccharolyticum | 34% id, 50% cov |
Lawrence Berkeley National Laboratory