Curated BLAST

Curated BLAST for Genomes

Found 2 curated entries in PaperBLAST's database that match '1.1.1.378' as complete word(s).

These curated entries have 2 distinct sequences.

Running ublast with E ≤ 0.01

Found 20 relevant proteins in Pseudomonas stutzeri RCH2, or try another query

Psest_0357: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) is similar to:	PaperBLAST
lra1 / C1DMX5: NAD(P)⁺-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii	41% id, 99% cov
lra1 / Q1NEJ0: NAD(P)⁺-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.	38% id, 98% cov

Psest_2358: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) is similar to:	PaperBLAST
lra1 / Q1NEJ0: NAD(P)⁺-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.	37% id, 99% cov
lra1 / C1DMX5: NAD(P)⁺-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii	37% id, 97% cov

Psest_1688: 3-oxoacyl-(acyl-carrier-protein) reductase is similar to:	PaperBLAST
lra1 / C1DMX5: NAD(P)⁺-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii	37% id, 99% cov
lra1 / Q1NEJ0: NAD(P)⁺-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.	33% id, 98% cov

Psest_2594: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) is similar to:	PaperBLAST
lra1 / C1DMX5: NAD(P)⁺-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii	37% id, 96% cov
lra1 / Q1NEJ0: NAD(P)⁺-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.	36% id, 96% cov

Psest_2081: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) is similar to:	PaperBLAST
lra1 / C1DMX5: NAD(P)⁺-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii	37% id, 97% cov
lra1 / Q1NEJ0: NAD(P)⁺-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.	35% id, 96% cov

Psest_3703: 3-oxoacyl-(acyl-carrier-protein) reductase, putative is similar to:	PaperBLAST
lra1 / Q1NEJ0: NAD(P)⁺-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.	36% id, 96% cov
lra1 / C1DMX5: NAD(P)⁺-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii	34% id, 97% cov

Psest_2148: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) is similar to:	PaperBLAST
lra1 / C1DMX5: NAD(P)⁺-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii	34% id, 98% cov

Psest_3241: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) is similar to:	PaperBLAST
lra1 / C1DMX5: NAD(P)⁺-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii	34% id, 96% cov
lra1 / Q1NEJ0: NAD(P)⁺-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.	32% id, 96% cov

Psest_1716: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) is similar to:	PaperBLAST
lra1 / Q1NEJ0: NAD(P)⁺-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.	34% id, 96% cov

Psest_2062: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) is similar to:	PaperBLAST
lra1 / Q1NEJ0: NAD(P)⁺-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.	33% id, 98% cov

Psest_2357: Short-chain dehydrogenases of various substrate specificities is similar to:	PaperBLAST
lra1 / C1DMX5: NAD(P)⁺-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii	32% id, 96% cov

Psest_1395: Short-chain alcohol dehydrogenase of unknown specificity is similar to:	PaperBLAST
lra1 / Q1NEJ0: NAD(P)⁺-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.	32% id, 96% cov
lra1 / C1DMX5: NAD(P)⁺-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii	29% id, 95% cov

Psest_1449: Short-chain dehydrogenases of various substrate specificities is similar to:	PaperBLAST
lra1 / C1DMX5: NAD(P)⁺-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii	34% id, 90% cov
lra1 / Q1NEJ0: NAD(P)⁺-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.	30% id, 90% cov

Psest_2696: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) is similar to:	PaperBLAST
lra1 / C1DMX5: NAD(P)⁺-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii	31% id, 96% cov
lra1 / Q1NEJ0: NAD(P)⁺-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.	30% id, 97% cov

Psest_0390: Short-chain dehydrogenases of various substrate specificities is similar to:	PaperBLAST
lra1 / C1DMX5: NAD(P)⁺-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii	28% id, 97% cov

Psest_0637: Short-chain dehydrogenases of various substrate specificities is similar to:	PaperBLAST
lra1 / Q1NEJ0: NAD(P)⁺-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.	29% id, 89% cov

Psest_0588: Short-chain dehydrogenases of various substrate specificities is similar to:	PaperBLAST
lra1 / Q1NEJ0: NAD(P)⁺-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.	34% id, 73% cov

Psest_0892: Short-chain alcohol dehydrogenase of unknown specificity is similar to:	PaperBLAST
lra1 / Q1NEJ0: NAD(P)⁺-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Sphingomonas sp.	29% id, 81% cov
lra1 / C1DMX5: NAD(P)⁺-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii	30% id, 75% cov

Psest_2924: Short-chain alcohol dehydrogenase of unknown specificity is similar to:	PaperBLAST
lra1 / C1DMX5: NAD(P)⁺-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii	24% id, 96% cov

Psest_2000: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) is similar to:	PaperBLAST
lra1 / C1DMX5: NAD(P)⁺-dependent L-rhamnose 1-dehydrogenase (EC 1.1.1.378; EC 1.1.1.173) from Azotobacter vinelandii	27% id, 77% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 18 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory