Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas stutzeri RCH2 (psRCH2)

Found 44 curated entries in PaperBLAST's database that match '1.1.1.44' as complete word(s).

These curated entries have 29 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Pseudomonas stutzeri RCH2, or try another query

Psest_2438: 3-hydroxyisobutyrate dehydrogenase
is similar to:
PaperBLAST

6PGD_TRYBB / P31072: 6-phosphogluconate dehydrogenase, decarboxylating; EC 1.1.1.44 from Trypanosoma brucei

26% id,
47% cov

Q6WAT5: phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Trypanosoma cruzi

25% id,
39% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Did not find any hits to reading frames.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory