Searching in Pseudomonas stutzeri RCH2 (psRCH2)
Found 11 curated entries in PaperBLAST's database that match '1.1.1.48' as complete word(s).
These curated entries have 10 distinct sequences.
Running ublast with E ≤ 0.01
Found 19 relevant proteins in Pseudomonas stutzeri RCH2, or try another query
| Psest_2357: Short-chain dehydrogenases of various substrate specificities is similar to: | PaperBLAST |
BPHYT_RS16920: L-arabinose 1-dehydrogenase; D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) from Burkholderia phytofirmans | 37% id, 90% cov |
PfGW456L13_2119: L-arabinose 1-dehydrogenase / D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) from Pseudomonas fluorescens | 30% id, 92% cov |
Pf6N2E2_5967: L-arabinose 1-dehydrogenase / D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) from Pseudomonas fluorescens | 30% id, 92% cov |
| Psest_2358: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) is similar to: | PaperBLAST |
Pf1N1B4_412: L-arabinose 1-dehydrogenase / D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) from Pseudomonas fluorescens | 36% id, 92% cov |
PfGW456L13_2119: L-arabinose 1-dehydrogenase / D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) from Pseudomonas fluorescens | 35% id, 92% cov |
Pf6N2E2_5967: L-arabinose 1-dehydrogenase / D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) from Pseudomonas fluorescens | 35% id, 92% cov |
| Psest_2062: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) is similar to: | PaperBLAST |
Pf6N2E2_5967: L-arabinose 1-dehydrogenase / D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) from Pseudomonas fluorescens | 35% id, 94% cov |
Pf1N1B4_412: L-arabinose 1-dehydrogenase / D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) from Pseudomonas fluorescens | 35% id, 94% cov |
PfGW456L13_2119: L-arabinose 1-dehydrogenase / D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) from Pseudomonas fluorescens | 34% id, 94% cov |
| Psest_2696: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) is similar to: | PaperBLAST |
Pf6N2E2_5967: L-arabinose 1-dehydrogenase / D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) from Pseudomonas fluorescens | 34% id, 92% cov |
PfGW456L13_2119: L-arabinose 1-dehydrogenase / D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) from Pseudomonas fluorescens | 34% id, 92% cov |
Pf1N1B4_412: L-arabinose 1-dehydrogenase / D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) from Pseudomonas fluorescens | 33% id, 92% cov |
| Psest_0357: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) is similar to: | PaperBLAST |
PfGW456L13_2119: L-arabinose 1-dehydrogenase / D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) from Pseudomonas fluorescens | 34% id, 91% cov |
| Psest_2148: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) is similar to: | PaperBLAST |
Pf6N2E2_5967: L-arabinose 1-dehydrogenase / D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) from Pseudomonas fluorescens | 32% id, 99% cov |
PfGW456L13_2119: L-arabinose 1-dehydrogenase / D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) from Pseudomonas fluorescens | 32% id, 99% cov |
Pf1N1B4_412: L-arabinose 1-dehydrogenase / D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) from Pseudomonas fluorescens | 32% id, 99% cov |
| Psest_1688: 3-oxoacyl-(acyl-carrier-protein) reductase is similar to: | PaperBLAST |
Pf6N2E2_5967: L-arabinose 1-dehydrogenase / D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) from Pseudomonas fluorescens | 33% id, 93% cov |
Pf1N1B4_412: L-arabinose 1-dehydrogenase / D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) from Pseudomonas fluorescens | 33% id, 93% cov |
PfGW456L13_2119: L-arabinose 1-dehydrogenase / D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) from Pseudomonas fluorescens | 32% id, 93% cov |
| Psest_1716: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) is similar to: | PaperBLAST |
Pf6N2E2_5967: L-arabinose 1-dehydrogenase / D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) from Pseudomonas fluorescens | 33% id, 92% cov |
Pf1N1B4_412: L-arabinose 1-dehydrogenase / D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) from Pseudomonas fluorescens | 33% id, 92% cov |
PfGW456L13_2119: L-arabinose 1-dehydrogenase / D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) from Pseudomonas fluorescens | 33% id, 92% cov |
| Psest_3522: 3-hydroxybutyrate dehydrogenase is similar to: | PaperBLAST |
Pf6N2E2_5967: L-arabinose 1-dehydrogenase / D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) from Pseudomonas fluorescens | 33% id, 91% cov |
PfGW456L13_2119: L-arabinose 1-dehydrogenase / D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) from Pseudomonas fluorescens | 32% id, 91% cov |
Pf1N1B4_412: L-arabinose 1-dehydrogenase / D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) from Pseudomonas fluorescens | 32% id, 91% cov |
| Psest_2594: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) is similar to: | PaperBLAST |
Pf1N1B4_412: L-arabinose 1-dehydrogenase / D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) from Pseudomonas fluorescens | 32% id, 90% cov |
PfGW456L13_2119: L-arabinose 1-dehydrogenase / D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) from Pseudomonas fluorescens | 32% id, 90% cov |
Pf6N2E2_5967: L-arabinose 1-dehydrogenase / D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) from Pseudomonas fluorescens | 32% id, 90% cov |
| Psest_2937: Short-chain alcohol dehydrogenase of unknown specificity is similar to: | PaperBLAST |
Pf6N2E2_5967: L-arabinose 1-dehydrogenase / D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) from Pseudomonas fluorescens | 32% id, 92% cov |
Pf1N1B4_412: L-arabinose 1-dehydrogenase / D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) from Pseudomonas fluorescens | 32% id, 92% cov |
PfGW456L13_2119: L-arabinose 1-dehydrogenase / D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) from Pseudomonas fluorescens | 31% id, 92% cov |
| Psest_2447: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) is similar to: | PaperBLAST |
BPHYT_RS16920: L-arabinose 1-dehydrogenase; D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) from Burkholderia phytofirmans | 30% id, 91% cov |
Pf1N1B4_412: L-arabinose 1-dehydrogenase / D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) from Pseudomonas fluorescens | 29% id, 91% cov |
Pf6N2E2_5967: L-arabinose 1-dehydrogenase / D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) from Pseudomonas fluorescens | 28% id, 91% cov |
| Psest_2081: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) is similar to: | PaperBLAST |
Pf1N1B4_412: L-arabinose 1-dehydrogenase / D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) from Pseudomonas fluorescens | 30% id, 91% cov |
Ac3H11_614: L-arabinose 1-dehydrogenase; D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) from Acidovorax sp. | 30% id, 89% cov |
BPHYT_RS16920: L-arabinose 1-dehydrogenase; D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) from Burkholderia phytofirmans | 27% id, 92% cov |
| Psest_1147: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) is similar to: | PaperBLAST |
PfGW456L13_2119: L-arabinose 1-dehydrogenase / D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) from Pseudomonas fluorescens | 29% id, 91% cov |
Pf6N2E2_5967: L-arabinose 1-dehydrogenase / D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) from Pseudomonas fluorescens | 28% id, 91% cov |
Pf1N1B4_412: L-arabinose 1-dehydrogenase / D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) from Pseudomonas fluorescens | 28% id, 91% cov |
| Psest_3241: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) is similar to: | PaperBLAST |
PfGW456L13_2119: L-arabinose 1-dehydrogenase / D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) from Pseudomonas fluorescens | 36% id, 67% cov |
Pf6N2E2_5967: L-arabinose 1-dehydrogenase / D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) from Pseudomonas fluorescens | 36% id, 67% cov |
Pf1N1B4_412: L-arabinose 1-dehydrogenase / D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) from Pseudomonas fluorescens | 36% id, 67% cov |
| Psest_0637: Short-chain dehydrogenases of various substrate specificities is similar to: | PaperBLAST |
BPHYT_RS16920: L-arabinose 1-dehydrogenase; D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) from Burkholderia phytofirmans | 33% id, 74% cov |
| Psest_0588: Short-chain dehydrogenases of various substrate specificities is similar to: | PaperBLAST |
Pf6N2E2_5967: L-arabinose 1-dehydrogenase / D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) from Pseudomonas fluorescens | 29% id, 74% cov |
Pf1N1B4_412: L-arabinose 1-dehydrogenase / D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) from Pseudomonas fluorescens | 29% id, 74% cov |
PfGW456L13_2119: L-arabinose 1-dehydrogenase / D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) from Pseudomonas fluorescens | 28% id, 74% cov |
| Psest_2399: Short-chain dehydrogenases of various substrate specificities is similar to: | PaperBLAST |
Pf6N2E2_5967: L-arabinose 1-dehydrogenase / D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) from Pseudomonas fluorescens | 25% id, 83% cov |
Pf1N1B4_412: L-arabinose 1-dehydrogenase / D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) from Pseudomonas fluorescens | 25% id, 83% cov |
PfGW456L13_2119: L-arabinose 1-dehydrogenase / D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) from Pseudomonas fluorescens | 23% id, 83% cov |
| Psest_0390: Short-chain dehydrogenases of various substrate specificities is similar to: | PaperBLAST |
BPHYT_RS16920: L-arabinose 1-dehydrogenase; D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) from Burkholderia phytofirmans | 28% id, 68% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 19 reading frames. Except for 3 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 2210749-2211570 (frame -1) on Psest_Contig47.1 is similar to: | PaperBLAST |
Ac3H11_614: L-arabinose 1-dehydrogenase; D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) from Acidovorax sp. | 29% id, 94% cov |
| 692356-693363 (frame +1) on Psest_Contig47.1 is similar to: | PaperBLAST |
BPHYT_RS16920: L-arabinose 1-dehydrogenase; D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) from Burkholderia phytofirmans | 32% id, 81% cov |
| 417987-419102 (frame -2) on Psest_Contig47.1 is similar to: | PaperBLAST |
BPHYT_RS16920: L-arabinose 1-dehydrogenase; D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) from Burkholderia phytofirmans | 28% id, 74% cov |
Lawrence Berkeley National Laboratory