Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas stutzeri RCH2 (psRCH2)

Found 11 curated entries in PaperBLAST's database that match '1.1.1.67' as complete word(s).

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 9 relevant proteins in Pseudomonas stutzeri RCH2, or try another query

Psest_2081: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

32% id,
94% cov

Psest_1688: 3-oxoacyl-(acyl-carrier-protein) reductase
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

32% id,
93% cov

Psest_1428: Threonine dehydrogenase and related Zn-dependent dehydrogenases
is similar to:
PaperBLAST

Q6ECH5: mannitol 2-dehydrogenase (EC 1.1.1.67) from Limosilactobacillus reuteri

29% id,
99% cov

Q83VI5: mannitol 2-dehydrogenase (EC 1.1.1.67) from Leuconostoc pseudomesenteroides

29% id,
93% cov

Q8KQG6: mannitol 2-dehydrogenase (EC 1.1.1.67) from Leuconostoc mesenteroides

29% id,
93% cov

Psest_3241: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

30% id,
95% cov

Psest_2594: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

30% id,
92% cov

Psest_2816: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase
is similar to:
PaperBLAST

Q6ECH5: mannitol 2-dehydrogenase (EC 1.1.1.67) from Limosilactobacillus reuteri

26% id,
98% cov

Q83VI5: mannitol 2-dehydrogenase (EC 1.1.1.67) from Leuconostoc pseudomesenteroides

26% id,
93% cov

Q8KQG6: mannitol 2-dehydrogenase (EC 1.1.1.67) from Leuconostoc mesenteroides

24% id,
93% cov

Psest_4317: zinc-binding alcohol dehydrogenase family protein
is similar to:
PaperBLAST

Q6ECH5: mannitol 2-dehydrogenase (EC 1.1.1.67) from Limosilactobacillus reuteri

28% id,
77% cov

Q8KQG6: mannitol 2-dehydrogenase (EC 1.1.1.67) from Leuconostoc mesenteroides

27% id,
77% cov

Q83VI5: mannitol 2-dehydrogenase (EC 1.1.1.67) from Leuconostoc pseudomesenteroides

26% id,
77% cov

More...

Psest_0588: Short-chain dehydrogenases of various substrate specificities
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

27% id,
74% cov

Psest_0880: NADPH:quinone reductase and related Zn-dependent oxidoreductases
is similar to:
PaperBLAST

Q6ECH5: mannitol 2-dehydrogenase (EC 1.1.1.67) from Limosilactobacillus reuteri

31% id,
23% cov

Q83VI5: mannitol 2-dehydrogenase (EC 1.1.1.67) from Leuconostoc pseudomesenteroides

31% id,
23% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 8 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory