Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas stutzeri RCH2 (psRCH2)

Found 7 curated entries in PaperBLAST's database that match '1.1.1.77' as complete word(s).

These curated entries have 5 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Pseudomonas stutzeri RCH2, or try another query

Psest_0672: Alcohol dehydrogenase, class IV
is similar to:
PaperBLAST

rhaZ / Q8ZKS2: L-lactaldehyde reductase (EC 1.1.1.77) from Salmonella typhimurium

46% id,
100% cov

BT3767: L-lactaldehyde reductase FucO (EC 1.1.1.77) from Bacteroides thetaiotaomicron

46% id,
98% cov

FUCO_ECOLI / P0A9S1: Lactaldehyde reductase; Propanediol oxidoreductase; EC 1.1.1.77 from Escherichia coli
FucO / b2799: L-1,2-propanediol oxidoreductase (EC 1.1.1.77) from Escherichia coli
fucO / P0A9S1: L-1,2-propanediol oxidoreductase (EC 1.1.1.77) from Escherichia coli

43% id,
100% cov

Psest_3782: Alcohol dehydrogenase, class IV
is similar to:
PaperBLAST

rhaZ / Q8ZKS2: L-lactaldehyde reductase (EC 1.1.1.77) from Salmonella typhimurium

37% id,
99% cov

FUCO_ECOLI / P0A9S1: Lactaldehyde reductase; Propanediol oxidoreductase; EC 1.1.1.77 from Escherichia coli
FucO / b2799: L-1,2-propanediol oxidoreductase (EC 1.1.1.77) from Escherichia coli
fucO / P0A9S1: L-1,2-propanediol oxidoreductase (EC 1.1.1.77) from Escherichia coli

36% id,
100% cov

BT3767: L-lactaldehyde reductase FucO (EC 1.1.1.77) from Bacteroides thetaiotaomicron

35% id,
100% cov

Psest_2268: Alcohol dehydrogenase, class IV
is similar to:
PaperBLAST

rhaZ / Q8ZKS2: L-lactaldehyde reductase (EC 1.1.1.77) from Salmonella typhimurium

37% id,
98% cov

FUCO_ECOLI / P0A9S1: Lactaldehyde reductase; Propanediol oxidoreductase; EC 1.1.1.77 from Escherichia coli
FucO / b2799: L-1,2-propanediol oxidoreductase (EC 1.1.1.77) from Escherichia coli
fucO / P0A9S1: L-1,2-propanediol oxidoreductase (EC 1.1.1.77) from Escherichia coli

35% id,
99% cov

BT3767: L-lactaldehyde reductase FucO (EC 1.1.1.77) from Bacteroides thetaiotaomicron

35% id,
100% cov

Psest_3967: Alcohol dehydrogenase, class IV
is similar to:
PaperBLAST

rhaZ / Q8ZKS2: L-lactaldehyde reductase (EC 1.1.1.77) from Salmonella typhimurium

35% id,
96% cov

FUCO_ECOLI / P0A9S1: Lactaldehyde reductase; Propanediol oxidoreductase; EC 1.1.1.77 from Escherichia coli
FucO / b2799: L-1,2-propanediol oxidoreductase (EC 1.1.1.77) from Escherichia coli
fucO / P0A9S1: L-1,2-propanediol oxidoreductase (EC 1.1.1.77) from Escherichia coli

33% id,
96% cov

BT3767: L-lactaldehyde reductase FucO (EC 1.1.1.77) from Bacteroides thetaiotaomicron

34% id,
93% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory