Searching in Pseudomonas stutzeri RCH2 (psRCH2)
Found 10 curated entries in PaperBLAST's database that match '1.1.5.2'.
These curated entries have 6 distinct sequences.
Running ublast with E ≤ 0.01
Found 6 relevant proteins in Pseudomonas stutzeri RCH2, or try another query
| Psest_2914: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family is similar to: | PaperBLAST |
D4P700: glucose 1-dehydrogenase (PQQ, quinone) (EC 1.1.5.2) from Pantoea ananatis | 49% id, 98% cov |
A0A0J6JEN3: glucose 1-dehydrogenase (PQQ, quinone) (EC 1.1.5.2) from Pseudomonas taetrolens | 48% id, 98% cov |
DHG_ECOLI / P15877: Quinoprotein glucose dehydrogenase; Glucose dehydrogenase [pyrroloquinoline-quinone]; EC 1.1.5.2 from Escherichia coli | 47% id, 98% cov |
| Psest_2915: Glucose/sorbosone dehydrogenases is similar to: | PaperBLAST |
I7A144: glucose 1-dehydrogenase (PQQ, quinone) (EC 1.1.5.2) from Thermus thermophilus | 38% id, 90% cov |
Q8ZUN8: glucose 1-dehydrogenase (PQQ, quinone) (EC 1.1.5.2) from Pyrobaculum aerophilum | 34% id, 98% cov |
DHGB_ACICA / P13650: Quinoprotein glucose dehydrogenase B; Glucose dehydrogenase B [pyrroloquinoline-quinone]; Soluble glucose dehydrogenase; s-GDH; EC 1.1.5.2 from Acinetobacter calcoaceticus | 32% id, 57% cov |
| Psest_3909: Glucose/sorbosone dehydrogenases is similar to: | PaperBLAST |
I7A144: glucose 1-dehydrogenase (PQQ, quinone) (EC 1.1.5.2) from Thermus thermophilus | 26% id, 77% cov |
| Psest_2054: PQQ-dependent dehydrogenase, methanol/ethanol family is similar to: | PaperBLAST |
DHG_ECOLI / P15877: Quinoprotein glucose dehydrogenase; Glucose dehydrogenase [pyrroloquinoline-quinone]; EC 1.1.5.2 from Escherichia coli | 27% id, 49% cov |
D4P700: glucose 1-dehydrogenase (PQQ, quinone) (EC 1.1.5.2) from Pantoea ananatis | 24% id, 49% cov |
A0A0J6JEN3: glucose 1-dehydrogenase (PQQ, quinone) (EC 1.1.5.2) from Pseudomonas taetrolens | 27% id, 27% cov |
| Psest_2060: PQQ-dependent dehydrogenase, methanol/ethanol family is similar to: | PaperBLAST |
DHG_ECOLI / P15877: Quinoprotein glucose dehydrogenase; Glucose dehydrogenase [pyrroloquinoline-quinone]; EC 1.1.5.2 from Escherichia coli | 26% id, 49% cov |
D4P700: glucose 1-dehydrogenase (PQQ, quinone) (EC 1.1.5.2) from Pantoea ananatis | 31% id, 14% cov |
DHG_ECOLI / P15877: Quinoprotein glucose dehydrogenase; Glucose dehydrogenase [pyrroloquinoline-quinone]; EC 1.1.5.2 from Escherichia coli | 27% id, 14% cov |
| Psest_1423: PQQ-dependent dehydrogenase, methanol/ethanol family is similar to: | PaperBLAST |
DHG_ECOLI / P15877: Quinoprotein glucose dehydrogenase; Glucose dehydrogenase [pyrroloquinoline-quinone]; EC 1.1.5.2 from Escherichia coli | 29% id, 43% cov |
A0A0J6JEN3: glucose 1-dehydrogenase (PQQ, quinone) (EC 1.1.5.2) from Pseudomonas taetrolens | 25% id, 44% cov |
D4P700: glucose 1-dehydrogenase (PQQ, quinone) (EC 1.1.5.2) from Pantoea ananatis | 37% id, 11% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 5 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 3105884-3108232 (frame -3) on Psest_Contig47.1 is similar to: | PaperBLAST |
D4P700: glucose 1-dehydrogenase (PQQ, quinone) (EC 1.1.5.2) from Pantoea ananatis | 49% id, 99% cov |
DHG_ECOLI / P15877: Quinoprotein glucose dehydrogenase; Glucose dehydrogenase [pyrroloquinoline-quinone]; EC 1.1.5.2 from Escherichia coli | 47% id, 99% cov |
Lawrence Berkeley National Laboratory