Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas stutzeri RCH2 (psRCH2)

Found 22 curated entries in PaperBLAST's database that match '1.13.11.1' as complete word(s).

These curated entries have 18 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Pseudomonas stutzeri RCH2, or try another query

Psest_2692: catechol 1,2-dioxygenase, proteobacterial
is similar to:
PaperBLAST

AO353_23525: Catechol 1,2-dioxygenase (EC 1.13.11.1) from Pseudomonas fluorescens

67% id,
100% cov

PfGW456L13_3822: Catechol 1,2-dioxygenase (EC 1.13.11.1) from Pseudomonas fluorescens

66% id,
100% cov

catA / A0F0B5: catechol-1,2-dioxygenase (EC 1.13.11.1) from Pseudomonas reinekei
A0F0B5: catechol 1,2-dioxygenase (EC 1.13.11.1) from Pseudomonas reinekei

66% id,
100% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory