Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas stutzeri RCH2 (psRCH2)

Found 8 curated entries in PaperBLAST's database that match '1.13.12.2' as complete word(s).

These curated entries have 8 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Pseudomonas stutzeri RCH2, or try another query

Psest_3710: glutamate synthase small subunit family protein, proteobacterial
is similar to:
PaperBLAST

Q88QV1: lysine 2-monooxygenase (EC 1.13.12.2) from Pseudomonas putida

48% id,
7% cov

davB / B3IVI6: L-lysine monooxygenase monomer (EC 1.13.12.2) from Pseudomonas putida

48% id,
7% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Did not find any hits to reading frames.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory