Curated BLAST for Genomes


Curated BLAST

Searching in Pseudomonas stutzeri RCH2 (psRCH2)

Found 10 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 8 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Pseudomonas stutzeri RCH2, or try another query

Psest_3699: Dehydrogenases (flavoproteins)
is similar to:

PHHY_PSEAE / P20586: p-hydroxybenzoate hydroxylase; PHBH; 4-hydroxybenzoate 3-monooxygenase; EC from Pseudomonas aeruginosa

25% id,
84% cov

RR42_RS21940: 4-hydroxybenzoate 3-monooxygenase (EC from Cupriavidus basilensis

25% id,
85% cov

PHHY_PSEFL / P00438: p-hydroxybenzoate hydroxylase; PHBH; PHBHase; 4-hydroxybenzoate 3-monooxygenase; EC from Pseudomonas fluorescens
pobA / P00438: p-hydroxybenzoate hydroxylase (EC from Pseudomonas fluorescens

25% id,
84% cov


Psest_3710: glutamate synthase small subunit family protein, proteobacterial
is similar to:

pobA / F2JUE7: 4-hydroxybenzoate 3-monooxygenase (EC from Marinomonas mediterranea

28% id,
36% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory