Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas stutzeri RCH2 (psRCH2)

Found 22 curated entries in PaperBLAST's database that match '1.14.13.9' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Pseudomonas stutzeri RCH2, or try another query

Psest_0176: 2-polyprenyl-6-methoxyphenol 4-hydroxylase
is similar to:
PaperBLAST

KMO_PSEFL / Q84HF5: Kynurenine 3-monooxygenase; PfKMO; Kynurenine 3-hydroxylase; EC 1.14.13.9 from Pseudomonas fluorescens
Q84HF5: kynurenine 3-monooxygenase (EC 1.14.13.9) from Pseudomonas fluorescens

24% id,
88% cov

ACDD_ASPCN / A0A2I2F284: Kynurenine 3-monooxygenase acdD; Aspcandine biosynthesis gene cluster protein D; Kynurenine 3-hydroxylase acdD; EC 1.14.13.9 from Aspergillus candidus

35% id,
17% cov

orf19.5443: kynurenine 3-monooxygenase; EC 1.14.13.9 from Candida albicans

33% id,
17% cov

Psest_0178: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family
is similar to:
PaperBLAST

ACDD_ASPCN / A0A2I2F284: Kynurenine 3-monooxygenase acdD; Aspcandine biosynthesis gene cluster protein D; Kynurenine 3-hydroxylase acdD; EC 1.14.13.9 from Aspergillus candidus

24% id,
68% cov

orf19.5443: kynurenine 3-monooxygenase; EC 1.14.13.9 from Candida albicans

33% id,
15% cov

Psest_2119: Glycine/D-amino acid oxidases (deaminating)
is similar to:
PaperBLAST

KMO_AEDAE / Q86PM2: Kynurenine 3-monooxygenase; Kynurenine 3-hydroxylase; EC 1.14.13.9 from Aedes aegypti
Q86PM2: kynurenine 3-monooxygenase (EC 1.14.13.9) from Aedes aegypti

27% id,
23% cov

Psest_1939: Tetratricopeptide repeat.
is similar to:
PaperBLAST

A1Z745: kynurenine 3-monooxygenase (EC 1.14.13.9) from Drosophila melanogaster

28% id,
19% cov

Psest_0111: Glycine/D-amino acid oxidases (deaminating)
is similar to:
PaperBLAST

Q95NP6: kynurenine 3-monooxygenase (EC 1.14.13.9) from Tribolium castaneum

30% id,
17% cov

orf19.5443: kynurenine 3-monooxygenase; EC 1.14.13.9 from Candida albicans

48% id,
7% cov

Psest_1634: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain
is similar to:
PaperBLAST

KMO_PSEFL / Q84HF5: Kynurenine 3-monooxygenase; PfKMO; Kynurenine 3-hydroxylase; EC 1.14.13.9 from Pseudomonas fluorescens
Q84HF5: kynurenine 3-monooxygenase (EC 1.14.13.9) from Pseudomonas fluorescens

37% id,
13% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

169358-170563 (frame +2) on Psest_Contig47.1
is similar to:
PaperBLAST

KMO_PSEFL / Q84HF5: Kynurenine 3-monooxygenase; PfKMO; Kynurenine 3-hydroxylase; EC 1.14.13.9 from Pseudomonas fluorescens
Q84HF5: kynurenine 3-monooxygenase (EC 1.14.13.9) from Pseudomonas fluorescens
Also see hits to annotated proteins above

23% id,
89% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory