Curated BLAST
Searching in Pseudomonas stutzeri RCH2 (psRCH2)
Found 21 curated entries in PaperBLAST's database that match '1.17.1.8' as complete word(s).
These curated entries have 16 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Pseudomonas stutzeri RCH2, or try another query
Psest_0966: dihydrodipicolinate reductase is similar to: | PaperBLAST |
DAPB_ECOLI / P04036: 4-hydroxy-tetrahydrodipicolinate reductase; HTPA reductase; EC 1.17.1.8 from Escherichia coli DapB / b0031: 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) from Escherichia coli dapB / P04036: 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) from Escherichia coli | 63% id, 97% cov |
Q9K1F1: 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) from Neisseria meningitidis | 61% id, 98% cov |
Q2YJN7: 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) from Brucella abortus | 49% id, 99% cov |
DvMF_0450: 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) from Desulfovibrio vulgaris | 44% id, 98% cov |
Q6G2G3: 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) from Bartonella henselae | 43% id, 99% cov |
DAPB_MYCTU / P9WP23: 4-hydroxy-tetrahydrodipicolinate reductase; HTPA reductase; EC 1.17.1.8 from Mycobacterium tuberculosis dapB / P9WP23: dihydropicolinate reductase subunit (EC 1.17.1.8) from Mycobacterium tuberculosis P9WP23: 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) from Mycobacterium tuberculosis | 33% id, 99% cov |
Q5HG24: 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) from Staphylococcus aureus | 39% id, 78% cov |
DAPB_THEMA / Q9X1K8: 4-hydroxy-tetrahydrodipicolinate reductase; HTPA reductase; EC 1.17.1.8 from Thermotoga maritima | 36% id, 85% cov |
dapB / P42976: dihydrodipicolinate reductase subunit (EC 1.17.1.8) from Bacillus subtilis | 30% id, 98% cov |
dapB / P40110: dihydropicolinate reductase subunit (EC 1.17.1.8) from Corynebacterium glutamicum P40110: 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) from Corynebacterium glutamicum | 29% id, 99% cov |
CA265_RS15670: 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) from Pedobacter sp. | 34% id, 81% cov |
Echvi_2395: 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) from Echinicola vietnamensis | 28% id, 96% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory