Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas stutzeri RCH2 (psRCH2)

Found 23 curated entries in PaperBLAST's database that match '1.2.1.24'.

These curated entries have 18 distinct sequences.

Running ublast with E ≤ 0.01

Found 17 relevant proteins in Pseudomonas stutzeri RCH2, or try another query

Psest_3654: succinate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

nmpF / A0A222FYW4: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24) from Alicycliphilus sp.

72% id,
99% cov

TGNE_ACIAD / Q6F9G0: Succinate semialdehyde dehydrogenase; SSA dehydrogenase; EC 1.2.1.24 from Acinetobacter baylyi

62% id,
100% cov

SSDH_ARATH / Q9SAK4: Succinate-semialdehyde dehydrogenase, mitochondrial; At-SSADH1; Aldehyde dehydrogenase family 5 member F1; NAD(+)-dependent succinic semialdehyde dehydrogenase; Protein ENLARGED FIL EXPRESSING DOMAIN 1; EC 1.2.1.24 from Arabidopsis thaliana

57% id,
91% cov

More...

Psest_4237: succinate-semialdehyde dehydrogenase
is similar to:
PaperBLAST

nmpF / A0A222FYW4: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24) from Alicycliphilus sp.

71% id,
100% cov

TGNE_ACIAD / Q6F9G0: Succinate semialdehyde dehydrogenase; SSA dehydrogenase; EC 1.2.1.24 from Acinetobacter baylyi

62% id,
100% cov

SSDH_ARATH / Q9SAK4: Succinate-semialdehyde dehydrogenase, mitochondrial; At-SSADH1; Aldehyde dehydrogenase family 5 member F1; NAD(+)-dependent succinic semialdehyde dehydrogenase; Protein ENLARGED FIL EXPRESSING DOMAIN 1; EC 1.2.1.24 from Arabidopsis thaliana

61% id,
91% cov

More...

Psest_4305: NAD-dependent aldehyde dehydrogenases
is similar to:
PaperBLAST

AldH / b1300: γ-glutamyl-γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19; EC 1.2.1.24; EC 1.2.1.99) from Escherichia coli
puuC / P23883: γ-glutamyl-γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19; EC 1.2.1.24; EC 1.2.1.99) from Escherichia coli

59% id,
99% cov

nmpF / A0A222FYW4: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24) from Alicycliphilus sp.

37% id,
97% cov

B0JFD4: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24) from Lucilia cuprina

37% id,
95% cov

More...

Psest_0905: NAD-dependent aldehyde dehydrogenases
is similar to:
PaperBLAST

AldH / b1300: γ-glutamyl-γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19; EC 1.2.1.24; EC 1.2.1.99) from Escherichia coli
puuC / P23883: γ-glutamyl-γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19; EC 1.2.1.24; EC 1.2.1.99) from Escherichia coli

41% id,
99% cov

nmpF / A0A222FYW4: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24) from Alicycliphilus sp.

38% id,
98% cov

KGSD1_AZOBR / Q1JUP4: Alpha-ketoglutaric semialdehyde dehydrogenase 1; alphaKGSA dehydrogenase 1; 2,5-dioxovalerate dehydrogenase 1; 2-oxoglutarate semialdehyde dehydrogenase 1; KGSADH-I; Succinate-semialdehyde dehydrogenase [NAD(+)]; SSDH; EC 1.2.1.26; EC 1.2.1.24 from Azospirillum brasilense
Q1JUP4: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24); 2,5-dioxovalerate dehydrogenase (EC 1.2.1.26) from Azospirillum brasilense

36% id,
97% cov

More...

Psest_0671: NAD-dependent aldehyde dehydrogenases
is similar to:
PaperBLAST

AldH / b1300: γ-glutamyl-γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19; EC 1.2.1.24; EC 1.2.1.99) from Escherichia coli
puuC / P23883: γ-glutamyl-γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19; EC 1.2.1.24; EC 1.2.1.99) from Escherichia coli

40% id,
95% cov

nmpF / A0A222FYW4: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24) from Alicycliphilus sp.

34% id,
98% cov

TGNE_ACIAD / Q6F9G0: Succinate semialdehyde dehydrogenase; SSA dehydrogenase; EC 1.2.1.24 from Acinetobacter baylyi

33% id,
98% cov

More...

Psest_2276: NAD-dependent aldehyde dehydrogenases
is similar to:
PaperBLAST

AldH / b1300: γ-glutamyl-γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19; EC 1.2.1.24; EC 1.2.1.99) from Escherichia coli
puuC / P23883: γ-glutamyl-γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19; EC 1.2.1.24; EC 1.2.1.99) from Escherichia coli

39% id,
95% cov

TGNE_ACIAD / Q6F9G0: Succinate semialdehyde dehydrogenase; SSA dehydrogenase; EC 1.2.1.24 from Acinetobacter baylyi

34% id,
97% cov

nmpF / A0A222FYW4: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24) from Alicycliphilus sp.

33% id,
98% cov

More...

Psest_2634: glycine betaine aldehyde dehydrogenase
is similar to:
PaperBLAST

nmpF / A0A222FYW4: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24) from Alicycliphilus sp.

38% id,
99% cov

AldH / b1300: γ-glutamyl-γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19; EC 1.2.1.24; EC 1.2.1.99) from Escherichia coli
puuC / P23883: γ-glutamyl-γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19; EC 1.2.1.24; EC 1.2.1.99) from Escherichia coli

38% id,
96% cov

KGSD1_AZOBR / Q1JUP4: Alpha-ketoglutaric semialdehyde dehydrogenase 1; alphaKGSA dehydrogenase 1; 2,5-dioxovalerate dehydrogenase 1; 2-oxoglutarate semialdehyde dehydrogenase 1; KGSADH-I; Succinate-semialdehyde dehydrogenase [NAD(+)]; SSDH; EC 1.2.1.26; EC 1.2.1.24 from Azospirillum brasilense
Q1JUP4: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24); 2,5-dioxovalerate dehydrogenase (EC 1.2.1.26) from Azospirillum brasilense

37% id,
98% cov

More...

Psest_0375: NAD-dependent aldehyde dehydrogenases
is similar to:
PaperBLAST

nmpF / A0A222FYW4: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24) from Alicycliphilus sp.

35% id,
100% cov

TGNE_ACIAD / Q6F9G0: Succinate semialdehyde dehydrogenase; SSA dehydrogenase; EC 1.2.1.24 from Acinetobacter baylyi

35% id,
98% cov

YneI / b1525: succinate semialdehyde dehydrogenase (NAD(P)+) Sad (EC 1.2.1.24) from Escherichia coli
sad / P76149: succinate semialdehyde dehydrogenase (NAD(P)+) Sad (EC 1.2.1.24) from Escherichia coli

35% id,
98% cov

More...

Psest_2436: methylmalonic acid semialdehyde dehydrogenase
is similar to:
PaperBLAST

KGSD1_AZOBR / Q1JUP4: Alpha-ketoglutaric semialdehyde dehydrogenase 1; alphaKGSA dehydrogenase 1; 2,5-dioxovalerate dehydrogenase 1; 2-oxoglutarate semialdehyde dehydrogenase 1; KGSADH-I; Succinate-semialdehyde dehydrogenase [NAD(+)]; SSDH; EC 1.2.1.26; EC 1.2.1.24 from Azospirillum brasilense
Q1JUP4: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24); 2,5-dioxovalerate dehydrogenase (EC 1.2.1.26) from Azospirillum brasilense

33% id,
98% cov

nmpF / A0A222FYW4: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24) from Alicycliphilus sp.

31% id,
97% cov

AldH / b1300: γ-glutamyl-γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19; EC 1.2.1.24; EC 1.2.1.99) from Escherichia coli
puuC / P23883: γ-glutamyl-γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19; EC 1.2.1.24; EC 1.2.1.99) from Escherichia coli

31% id,
95% cov

More...

Psest_1179: 2-hydroxy-3-oxopropionate reductase
is similar to:
PaperBLAST

SSR1 / B1Q3F6: NAD-dependent succinate semialdehyde dehydrogenase (EC 1.2.1.24) from Solanum lycopersicum

29% id,
100% cov

Psest_3781: methylmalonic acid semialdehyde dehydrogenase
is similar to:
PaperBLAST

AldH / b1300: γ-glutamyl-γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19; EC 1.2.1.24; EC 1.2.1.99) from Escherichia coli
puuC / P23883: γ-glutamyl-γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19; EC 1.2.1.24; EC 1.2.1.99) from Escherichia coli

31% id,
94% cov

YneI / b1525: succinate semialdehyde dehydrogenase (NAD(P)+) Sad (EC 1.2.1.24) from Escherichia coli
sad / P76149: succinate semialdehyde dehydrogenase (NAD(P)+) Sad (EC 1.2.1.24) from Escherichia coli

30% id,
98% cov

Q97XS9: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24); glyceraldehyde-3-phosphate dehydrogenase (NADP+) (EC 1.2.1.9) from Saccharolobus solfataricus

30% id,
96% cov

More...

Psest_2438: 3-hydroxyisobutyrate dehydrogenase
is similar to:
PaperBLAST

SSR1 / B1Q3F6: NAD-dependent succinate semialdehyde dehydrogenase (EC 1.2.1.24) from Solanum lycopersicum

29% id,
99% cov

Psest_1322: 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases
is similar to:
PaperBLAST

SSR1 / B1Q3F6: NAD-dependent succinate semialdehyde dehydrogenase (EC 1.2.1.24) from Solanum lycopersicum

30% id,
95% cov

Psest_3079: delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain)
is similar to:
PaperBLAST

nmpF / A0A222FYW4: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24) from Alicycliphilus sp.

29% id,
96% cov

AldH / b1300: γ-glutamyl-γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19; EC 1.2.1.24; EC 1.2.1.99) from Escherichia coli
puuC / P23883: γ-glutamyl-γ-aminobutyraldehyde dehydrogenase (EC 1.2.1.19; EC 1.2.1.24; EC 1.2.1.99) from Escherichia coli

31% id,
91% cov

B0JFD4: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24) from Lucilia cuprina

30% id,
90% cov

More...

Psest_0855: NAD-dependent aldehyde dehydrogenases
is similar to:
PaperBLAST

nmpF / A0A222FYW4: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24) from Alicycliphilus sp.

28% id,
95% cov

Q97XS9: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24); glyceraldehyde-3-phosphate dehydrogenase (NADP+) (EC 1.2.1.9) from Saccharolobus solfataricus

27% id,
98% cov

Q6A2H2: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24) from Pongo pygmaeus

27% id,
93% cov

More...

Psest_0247: NAD-dependent aldehyde dehydrogenases
is similar to:
PaperBLAST

nmpF / A0A222FYW4: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24) from Alicycliphilus sp.

29% id,
90% cov

TGNE_ACIAD / Q6F9G0: Succinate semialdehyde dehydrogenase; SSA dehydrogenase; EC 1.2.1.24 from Acinetobacter baylyi

31% id,
81% cov

B0JFD4: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24) from Lucilia cuprina

28% id,
88% cov

More...

Psest_2788: Phosphoglycerate dehydrogenase and related dehydrogenases
is similar to:
PaperBLAST

SSR1 / B1Q3F6: NAD-dependent succinate semialdehyde dehydrogenase (EC 1.2.1.24) from Solanum lycopersicum

26% id,
37% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 16 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory